| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003391 |
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| Symbol | |
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| ID | 8557124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1948018 |
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| End bp | 1949214 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646406486 |
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| Product | PrpF protein involved in 2-methylcitrate cycle |
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| Protein accession | YP_003286016 |
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| Protein GI | 262394162 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACA ATACTCCGAA TCAAATGAGC CAAATCAAAG TGCCGGCGAC GTACATGCGT
GGCGGTACAA GTAAAGGTGT CTTTTTCAAC CTAGAGGATT TGCCTCAAGA AGCGCAAGTG
GCTGGAGCCG CGCGTGACAA GCTGTTGTTA CGTGTTATCG GCAGCCCGGA TCCTTACGCG
AAGCAAATTG ATGGCATGGG TGGTGCGACC TCCAGCACCA GTAAAACAGT GATTGTTTCT
CGCAGTAGCC GAGCAGATCA CGATGTTGAC TACTTGTTTG GACAAGTGTC GATCGACAAA
CCATTCGTCG ATTGGAGTGG TAACTGCGGC AACTTGTCTG CGGCAGTTGG TCCCTTCGCC
ATTCATGCTG GGCTGATTCC ACAAGATCGC ATTCCAGAAA ATGGCATTGT GACGGTGCGT
GTTTGGCAGG TGAACATCAG CAAAACCATC TTGATTCACG TTCCAATTGT TAATGGTTTC
GTCCAAGAAA CCGGCGAGTT TGAGCTCGAT GGCGTGACGT TTCCGGCCGC CGAGATTCAA
GTCGATTTCG TTGACCCTTC TGATGGCGAA GGCAGCATGT TCCCAACAGG CAACTTAGTC
GATGATTTAG TGGTACCGGA CGTAGGTACG TTTAACGCCA CATTTATAAA TGCGGGCATT
CCAACCATTT TTATTGATGC TGAATCGATT GGTTATCAGG GCACTGAGCT ACAAGACGAT
ATCAACAACG ATGATGCCGC ATTGGCGATG TTCGAATCTA TCCGTGCGCA TGGCGCATTA
AAAATGGGCC TGATTTCTGA TTTAGAAGAA GCTCAAACAC GCCAACATAC GCCGAAAATA
GCATTTGTTG CTAAACCGAA AAGTTACCTG TCTTCAAGTG GCAAAGCGGT CAATGATACA
GACATAGACG TGTTGGTTCG TGCGTTGTCG ATGGGCAAAC TTCACCATGC AATGATGGGA
ACCGCAGCTG TGGCGATTGC TTCAGCTGCG TGTGTGCCGG GGACGCTGGT GAACTTGGCT
GCTGGTGGCG GTGAAAAAGA GTCAGTGACT TTTGGCCACC CCTCAGGAAC GTTAAAAGTT
GGAGCACAAG CGAAGCAAAC TGAAAAGGGC TGGGTGGTAC AAAAAGCCAT CATGAGCCGA
AGTGCGAGAA TACTAATGGA GGGATTTGTG CGTGTACCCT CTGATGTCTT TGAGTGA
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| Protein sequence | MENNTPNQMS QIKVPATYMR GGTSKGVFFN LEDLPQEAQV AGAARDKLLL RVIGSPDPYA
KQIDGMGGAT SSTSKTVIVS RSSRADHDVD YLFGQVSIDK PFVDWSGNCG NLSAAVGPFA
IHAGLIPQDR IPENGIVTVR VWQVNISKTI LIHVPIVNGF VQETGEFELD GVTFPAAEIQ
VDFVDPSDGE GSMFPTGNLV DDLVVPDVGT FNATFINAGI PTIFIDAESI GYQGTELQDD
INNDDAALAM FESIRAHGAL KMGLISDLEE AQTRQHTPKI AFVAKPKSYL SSSGKAVNDT
DIDVLVRALS MGKLHHAMMG TAAVAIASAA CVPGTLVNLA AGGGEKESVT FGHPSGTLKV
GAQAKQTEKG WVVQKAIMSR SARILMEGFV RVPSDVFE
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