Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003321 |
Symbol | |
ID | 8557054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 1881515 |
End bp | 1883650 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646406416 |
Product | ferrichrome-iron receptor |
Protein accession | YP_003285946 |
Protein GI | 262394092 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGTC CGAATCGATT TCATCGTTCT GCGGTTGCAG TCGTGGTATC CGCGCTTATT GCTGGTCACG CCAGTGCCAC TGAGAGCACT TCTCAGCACG AAACTATCAC AGTACTTGGC GAAACATACC GAAACACCGC AACTAAAACC GTTTTAGAAC CGGAAGAAAC GCCGCAAGCG ATCACGGTAA TCACTAAAGA TGACATGGAC CTGCGCGGCG TAAACTCGGT GAGCGAAGCA TTGCGTTACG CGCCTGGCGT AAATACAGAG CTGCGTGGCG GTGCCGTTTC CCGACTTGAC CTATTCAATA TTCGTGGTTT TATTAACTAC ACCAACTTTT ATGATGGTCT TCCTTTGCTG TACAACGGCT GGAACCTTCA ACCTCAGGTC GATTCCGTTG CCCTTGAACA AATCGAGGTT TTTAAAGGGC CAACGTCTGT TCTTTACGGC AATATTCCAC CAGGAGGCAT GGTTAATATT ATCGCCAAGG CGCCTCAGTC AACACCTTCG CACTCTGTCT CGATTAGTAC TGGGACTAAC AGGCTAAAAG AACTGACGTT CGACACCACA GGACAAATTG GTGACTCTAA TGTTGATTAC CGTATTATCG GCCTAGCAAA ACAGCGAGAT GGTCAAGCCG ATACGTCTGA AGACGAACGT TATGTCCTCG CTCCATCTTT CAATTGGCAA GCGACAGAAA GCACCTTAGT CAACGTGAAT GTTTACTATC AAAATGATCC ATCAGCAGGT ATCTACACGA CCGTGCCAGC GTCTGGCTCA GTGATTGACA ACCCACTTGG CTCGATGTCA CCAAGCACTT ATTTGGGGGA TGAGGACTGG AACACTTACG AACGCGAAGT TCTGATGATG GGTTACAAAG TCCAACACGA CTTTAACAAC AGTTGGCAAT TTCTACAGAA TGCCCGCTAC ATGACCGCCG ATGCCTATCA GGAAAACACA TATAACGGTG CACTTGAAGC AGATAACCGT ACCGTTGGTC GAAATGCTTA TTTAACCGAT GAAAAGTCCA AATCCTTTGT GATTGACAAC CAACTATCTG GCTACGTTAA AACAGGAGAC TTTGAACATA ACTTATTGTT CGGAATTGAT TATCAGTATC TAGATTCGGA TGTAAAATAC AAAGATACGC TTGGGTATTC GCTAACTCAG GACATCTTCA ATCCTGACCA CAACAGCATT GATCGTAATG CACTGAATTT CCAATACAAA CAAAACTTAG ATATCAAAAC GAAGCAAATT GGCGTTTATT TGCAAGATCA AGTTCGTTAC GACCAACTTG TAATGATTGC AGGTCTTCGT TGGGATAAAT ACGATTCAAA TACGGACGCC GTGAGCGATT ATCTAGGAAC AATATCCAAC AGCAAGGAAG AGTTAGACGA CACCAACGTA TCTTTCCGAG TCGGCGGTTT GTATGAACTC GACTTCGGCC TATCCCCATA CCTTACGTAC TCCGAGAGTT TTGAGCCAAT TGCGGGTGCC GATGCCACAG GCAAAGCGTT TGAACCATCA ACCGGGCATC AGTGGGAACT CGGTTTTAAA TACGCGCCAT TGTCTGGCGA TATTTCGGGT AATTTAGCGT TCTTCCATAT TACGAAGAAA AACGCGATCT TGACCGATCC GAATAATCCT TATGCACCGA ACTATCAAGC GGGCGAAGTG GTATCACAGG GTGTTGAACT AGAGGCAAAG TGGCAAGCCA CAGCACAAGC TGATTTCACT CTAGGCTACA CGTATACCGA TATGGAGATT ACCGAAGACA GTTATTACAA CCAAGAAGGT AAAACGCCGG TTTGGGTGCC TGAGCAAACG GCTTCTCTAT GGGCCAATTA CTTCTTTGAA GGAAATCTTT CAGGCCTTCG TACCAGTGCT GGCGTTCGCT ATGTCGGAGA AGCACAAATT GATGCACAGA ATAGTCAAAA AGTACCGGAC TACACCTTGT TTGATTTGGC AGCAAGTTAC GATTTTTCAA CAGTATCTGA ATCAATGAAA GGGGCTAGCG TCACCCTTTC TGCAAGCAAT CTATTCGATA AAGAATACTA TTCTTGTTAC GACAAAAATA ACTGTTGGTT TGGCGCTGAG CGCTCTATTG AAGCGAAATT AGAATATAAT TTCTAA
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Protein sequence | MESPNRFHRS AVAVVVSALI AGHASATEST SQHETITVLG ETYRNTATKT VLEPEETPQA ITVITKDDMD LRGVNSVSEA LRYAPGVNTE LRGGAVSRLD LFNIRGFINY TNFYDGLPLL YNGWNLQPQV DSVALEQIEV FKGPTSVLYG NIPPGGMVNI IAKAPQSTPS HSVSISTGTN RLKELTFDTT GQIGDSNVDY RIIGLAKQRD GQADTSEDER YVLAPSFNWQ ATESTLVNVN VYYQNDPSAG IYTTVPASGS VIDNPLGSMS PSTYLGDEDW NTYEREVLMM GYKVQHDFNN SWQFLQNARY MTADAYQENT YNGALEADNR TVGRNAYLTD EKSKSFVIDN QLSGYVKTGD FEHNLLFGID YQYLDSDVKY KDTLGYSLTQ DIFNPDHNSI DRNALNFQYK QNLDIKTKQI GVYLQDQVRY DQLVMIAGLR WDKYDSNTDA VSDYLGTISN SKEELDDTNV SFRVGGLYEL DFGLSPYLTY SESFEPIAGA DATGKAFEPS TGHQWELGFK YAPLSGDISG NLAFFHITKK NAILTDPNNP YAPNYQAGEV VSQGVELEAK WQATAQADFT LGYTYTDMEI TEDSYYNQEG KTPVWVPEQT ASLWANYFFE GNLSGLRTSA GVRYVGEAQI DAQNSQKVPD YTLFDLAASY DFSTVSESMK GASVTLSASN LFDKEYYSCY DKNNCWFGAE RSIEAKLEYN F
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