| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003169 |
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| Symbol | |
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| ID | 8556902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1744165 |
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| End bp | 1745127 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646406264 |
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| Product | integron integrase IntI4 |
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| Protein accession | YP_003285794 |
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| Protein GI | 262393940 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGTC AGTTTTTACT TAGTGTAAAA GAGCACATGC TTACTCGTCA TTATGCGAAT
AAAACCATCG AAAGTTATCT ATTTTGGATA AAACGCTTTA TCACTTTCCA CCAGCTTGCC
CACCCTTCAA CACTAGCAGA AGATGATGTA GTTCAGTTCC TGAGTTACTT AGCGGTAAAA
GAAAAAGTTG CGGTAAAAAC GCAAGCTTTG GCACTGAACT CAATATCATT TTTATATCGT
GATTATTTCA AAACTCCACT ATCACTTGAT ATGAGATTTC AGAAATCCCT GACCGAAAAG
AAACTTCCCG TTGTATTAAC TAGGGAGGAG ATCCGACGAT TCGTTCAACA TATCGACCCG
AGGTATAAAC TCCATATTCA GCTGCTTTAT GGCTCAGGGC TTCGAGTCAT GGAGTGTTTG
CGCTTAAGAG TTCAGGACAT CGATTATGAT TATGGCGCAG TTCGTGTTTG GCAAGGAAAA
GGAGGTAAAA ATCGTACCGT AACGTTAGCA AAAGAGCTAC ATGAGCCGCT TAAAGCTCAG
GTTAATTTAG CAAGAGATTA CTATTTTAAA GATAGACACA TGCCTGGTTA TGCGGGTGTA
TACATCTCTG AAGGTTTACG ACGTAAATAC CCAAAAGCGG AGCTAGATTT TAACTGGCAC
TTTTTATTCC CATCAACAAA GTTAAGTACA GATCGGGACA CCGGAGAGCT CAGAAGGCAT
CATATCAATG AAAGTGCAAT ACAAAGAGCG GTAAAGCGCG CTGCAACGGA TGCGTGTATC
GAGAAAACAG TAACATGTCA TACACTCAGG CACAGCTTTG CCACGCATTT ATTAGAGTCT
GGTGCAGATA TTAGAACAGT ACAAGAGCAG CTTGGTCACA CCGATGTAAA AACCACCCAG
ATTTATACTC ACGTTATCGA GCGCGGGGCT GGCGGCGTGT TGAGTCCATT ATCCAGCCTT
TAG
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| Protein sequence | MKSQFLLSVK EHMLTRHYAN KTIESYLFWI KRFITFHQLA HPSTLAEDDV VQFLSYLAVK
EKVAVKTQAL ALNSISFLYR DYFKTPLSLD MRFQKSLTEK KLPVVLTREE IRRFVQHIDP
RYKLHIQLLY GSGLRVMECL RLRVQDIDYD YGAVRVWQGK GGKNRTVTLA KELHEPLKAQ
VNLARDYYFK DRHMPGYAGV YISEGLRRKY PKAELDFNWH FLFPSTKLST DRDTGELRRH
HINESAIQRA VKRAATDACI EKTVTCHTLR HSFATHLLES GADIRTVQEQ LGHTDVKTTQ
IYTHVIERGA GGVLSPLSSL
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