Gene VEA_003065 details

Gene Information

• Locus tag: VEA_003065
• ID: 8556794
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: -
• Start bp: 1621929
• End bp: 1625450
• Gene Length: 3522 bp
• Protein Length: 1173 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 646406156
• Product: membrane protein putative
• Protein accession: YP_003285690
• Protein GI: 262393836

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAATC CACTTCCTCC AAAAACTTCG ATGTTCTGGC ACGACAACAG CTATACCTAT 
GAGGAGGCCG TTCAGGCATT TGAAAGCGAT GGTACGCTGA AATCGCTGAA TATCGTTCCA 
ACCACGGAAT CCGATGATCT TGCTGGCTCA CCCCCAGAGC GCAGTATGTT TTGGGAGGGA 
GAAACAAAAA AAATCGATCC GCCACCGCCG TCAGAACCAG AACCTCTCAA TTTAAAAAAC 
GAGAAAGAAC CAACAGAGGC TTTACCGGCA CACTTCATCC CTGTTCGCTA CGCCATCGAT 
CAGCTAGAAA CGGAAGAAAC ACAATCTTTT GGTTTGCCTG AAGAATGGAA AGGCCAAGGC 
CCAGCCAAAC TCAATACCGT TGGCTATACC CTTCGTCAGC TTCGCGATGG TTGGTTGTAT 
GTCTATGATG CAATCAACAA AAGCCTAGAC GAATATGAAA TCAAAGGAAC GCAATTCACA 
CTCTACAAGC TAGGAGAGTC GGAAAGCCCA GAGTCCGAAC AGCGTGGCAC ACCAGAAGGT 
GCAAAACCTT TCCTTACTTA CGAAGACGGG AGTGTGCTGT CGATTTGTTA CTCAGAACAC 
CGTTGGACAT GGAACATGTT CATGCGCGTC CTTAACAATC CGAGTAATCA TATCGATCGA 
ATGCAGACTG TTGTCCTGTC TGCAAACGAT AATCAGCCCA ACATTGCACC AATCGATAAG 
TTAACTCAAG TGGCTGATAT TGAATCTTCC GCCGTTGATG ATGGGCGTTT TGCGGATTCC 
GGCATCACTA CCAAAGCTGA TGAAGATGGT TCTATCTTTA AACCTGTCGC AGCCGAGAGT 
GATTTAACCT CTTCAATTCC AGAAGAAGAA TCGGGCTACT TCGTCGCGAT AAAAGATTAC 
GCCGCAGACA TTCAAGATAT GTCGCTGCAT TTTGTTGGCG CTGCAAGTCC CTACCGCCTT 
TTCATTGACC AGTTTTCAAA CCAGTGGAAC TTAATGCAGA CCGCCATGCA GCTGTGCATG 
TTCGGGGCAA GCGACAATAT AGACATGCCA GCTAGCGTTA AACGTAACAG TGAAGAGCTG 
TCGTTTTATA CCGACATGGC AGAATATTAT GACTCATCCA GTCAACTCGA TTTGGCAGAG 
CAGAATAAAA GCTCAGTTCA ATCAGGCTAT CCTGCTAAAT TTTCCGCTGG AGCGATTGAA 
TCACACCAAC ATACCCAAAG TGACATTGCC AAAGCAATAC AGGACAAATA TCGAATTTCC 
GCGAGTCGAT TTGGTAAATA CGAACAATGG ATAGCGACTG AACGCTGGCG CAAGCAGCTC 
AACTGGAAGC AAATGCTGAG CGAAATGCAA GAGCTGTCAG AGCAAAAAGA AACCATGCTT 
GCCGAAGTTG TCTCGGTAAA AAGCGACTTT ATTGCTGTAA TGGAATCTTT GACACCTCAT 
CATCTCGAAA GAACCTTCGA CCTATACAGC GAAGACACGC AGTACAGCTT GTATCAACTC 
CATAAGCAAG CCGTTGAGTC ATTTACTCTG GTGATGCAAG AAGAAGACCG CCAATGGGCT 
GAAAGCCAAT GGGAGAAACC AACCAGTTTA CTCGCACTCT ACACTTCCGG GTTTAGTCGT 
AGTCTCTTTA AACAAGTGGA GAAATTAATT CCTGAACAAG TTTCAAATCA GGTAGGTGAA 
GTAGACGTCG CCAAAAATGC TCCAGACACT GAAAGCTCAG ACAAACAGTT CATGGACTAC 
GTTTCGGCAG CAAGTAACCG TGTGGGTATG TATGCAAAAG TAATGGACTT TATTTCTAAC 
CCAAATACTG CAGAAACCGA GTTTCTAAGA GATATAGCAA AAGGATTCGA TGAGCTAGAT 
AGCATATTCA AAGCGACTAA CAGCGCTTTA TTGAAGGGGG TAATAGAGGT TGGCGTTAGC 
CTAACAGCCC AAGCGTCTAT CTTAATGATA TCTCTATTGT CAAGACCGCT CACCCGAACA 
AGTTTTTACC TAAGAGCTGC CGTTGTAGAA CGTTTGTCGA TAGATACTCC AATCAATGTC 
AATAAAGGCT ACGCTCAAAA TTTTGGTACC TGGAAATCCA ATCATGATAA AAAACTCGTC 
GCATCTAACC AAAACAAGGA AGTCTTAGCA GCCTTCAACA AGGGTGATAA AACTATATCA 
AACACGCAGT ATAAGAAGGC TCTCCAGCAA CAGCGGCACC TTCAAAAAAG TTTAGCCGTT 
GCGACGTTGG AATACCCACA GTATATAGAA CTTCCAGATG ACGTACTTGA GGCAACAATT 
CAAATGCGTA AAGACATATG GGATAACAGA TTAAACAACC TTAAGAAACG GTTTGAATAT 
GTGGGTGGTT TAGGCTTCTT AGCTCTGATT TTTAACTGCC TCGCACTTGC TGATGCAATG 
AACAGTATTC AAGAAACAGG GCTCATGTCT CAAGATGATT TCTTAGATAT TCAACAAAAG 
CTTTTTTACA CTGCCGGAGC TTGGACGGGC ATTCGTACTG GGAAACTATG GGATAAGGTT 
AAGGGCAGTG ACGAGCTCAG AGAGCATTCG CTAAAAACTC TTAAAAATTT AGTAGACAGA 
AATACAAAAG GCTTTGAAAA CCTGATTCTA GATGACTTAA AAGTTTTTAA TAAATGGCTC 
GCGATTACAG GTGCTTTAGG AGCGCTGGCT TCAGGTATTG AGGCTTACCG TTCTTGGCAG 
AGTGTAGATG ACGTTTATGG TCTCGAAAGC AAATTGTATT TAGCAAATAC CGTAACGCTT 
GGTTTAACTG GTGCGATTGG TGCGTTTCAG TTCGTAGGAG CCTCTACTGG TACTTTTTCG 
ACTAACTTAC TTTTTGGAGG CCCAATAACG GCAGCTTTAG TTATTCTTAC AGTTACATAC 
CTAGCCATCA ATTATAAACT CAACAAACTG AAACAAGATG ATTTCCAAAA ATGGTTAGAT 
AAACTGCCTT GGGGTTATCA CCCGAGTCGT ACTCAGTGGA GCCAATCTGC AAGCTTGCCC 
GAAAGAGAGA AGCACAATTC AGCATTGGTG CAACAAGCAC TGTTTGACTT ACAATCTATT 
ATTCAACAGC CAACGGTATA CCATCAGCCT ATTGAAAAAA TACAGGCTTA TCCAGGCTAT 
ACGCATCATG AGCTAGTTGG CTTGGAAGTG CATATTCAGC TGCCACATCG TGCTGCAACG 
AATGGTGTTA CAGTGAGTAC CAACACCAAG GCAACAGAAG ATGATTTGAC GTCCGGCTCT 
TGGTATCAAA ACGCAGATTT AGTCACGCTA CAAACACAGA GCCAAGCTAG CAAAGAGTTA 
CTGGTGTATA AGGTAACATT GCCGATTAAA GAGACCGATC AATACCTTGC CATGCAAGTA 
GCGTATGATG TGGAAGATGA TGCCCCATCA AAGCGTGAGT ATTGGTTCCA AAATAGCGTA 
AAACAGAGTG CAACTCATAG CGTAATTTCA GACAATACCA AACAAAACAT CATTAAAAAG 
TCACTCACCT CAGTTGTTGG CACATTAGGT TTTAAGGAGT AA 

 

Protein sequence

MSNPLPPKTS MFWHDNSYTY EEAVQAFESD GTLKSLNIVP TTESDDLAGS PPERSMFWEG 
ETKKIDPPPP SEPEPLNLKN EKEPTEALPA HFIPVRYAID QLETEETQSF GLPEEWKGQG 
PAKLNTVGYT LRQLRDGWLY VYDAINKSLD EYEIKGTQFT LYKLGESESP ESEQRGTPEG 
AKPFLTYEDG SVLSICYSEH RWTWNMFMRV LNNPSNHIDR MQTVVLSAND NQPNIAPIDK 
LTQVADIESS AVDDGRFADS GITTKADEDG SIFKPVAAES DLTSSIPEEE SGYFVAIKDY 
AADIQDMSLH FVGAASPYRL FIDQFSNQWN LMQTAMQLCM FGASDNIDMP ASVKRNSEEL 
SFYTDMAEYY DSSSQLDLAE QNKSSVQSGY PAKFSAGAIE SHQHTQSDIA KAIQDKYRIS 
ASRFGKYEQW IATERWRKQL NWKQMLSEMQ ELSEQKETML AEVVSVKSDF IAVMESLTPH 
HLERTFDLYS EDTQYSLYQL HKQAVESFTL VMQEEDRQWA ESQWEKPTSL LALYTSGFSR 
SLFKQVEKLI PEQVSNQVGE VDVAKNAPDT ESSDKQFMDY VSAASNRVGM YAKVMDFISN 
PNTAETEFLR DIAKGFDELD SIFKATNSAL LKGVIEVGVS LTAQASILMI SLLSRPLTRT 
SFYLRAAVVE RLSIDTPINV NKGYAQNFGT WKSNHDKKLV ASNQNKEVLA AFNKGDKTIS 
NTQYKKALQQ QRHLQKSLAV ATLEYPQYIE LPDDVLEATI QMRKDIWDNR LNNLKKRFEY 
VGGLGFLALI FNCLALADAM NSIQETGLMS QDDFLDIQQK LFYTAGAWTG IRTGKLWDKV 
KGSDELREHS LKTLKNLVDR NTKGFENLIL DDLKVFNKWL AITGALGALA SGIEAYRSWQ 
SVDDVYGLES KLYLANTVTL GLTGAIGAFQ FVGASTGTFS TNLLFGGPIT AALVILTVTY 
LAINYKLNKL KQDDFQKWLD KLPWGYHPSR TQWSQSASLP EREKHNSALV QQALFDLQSI 
IQQPTVYHQP IEKIQAYPGY THHELVGLEV HIQLPHRAAT NGVTVSTNTK ATEDDLTSGS 
WYQNADLVTL QTQSQASKEL LVYKVTLPIK ETDQYLAMQV AYDVEDDAPS KREYWFQNSV 
KQSATHSVIS DNTKQNIIKK SLTSVVGTLG FKE