| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003062 |
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| Symbol | |
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| ID | 8556791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1617535 |
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| End bp | 1618212 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646406153 |
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| Product | DNA-binding response regulator |
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| Protein accession | YP_003285687 |
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| Protein GI | 262393833 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTG TACTTTTGGT AGAAGATAAT CGTGAAATAG CGGGAATGTT GTTCGATTAT
TTTGAATGTG CTGGCATGCA GCTGGATTAC GCCGACAACG GTGAGCTAGG CTTAAAACTG
GCGATGGATA ATGCGTTTGA CATCATTTTG CTCGACCTCA TGCTGCCGCG CATGGATGGC
CTAACACTGT GCAACAAGCT GCGCGATGCG GGTAATAACA CTCCGGTGTT GATGTTGACT
GCACTTGATA GCCGAGACGA CGTGCTCAAA GGCTTCCAAC ACGGCGCCGA CGACTACCTC
ACCAAACCGT TTGATCTCGA TATTCTTGAA GCACGCATGA CTGCATTGAT TAAACGCTAC
CGCGGTACGG TTGCATCAAC CAAACTCCAG TATGGCGAAG TGTCTATCGA TCAAAAAACG
CATCAAGCCT ACCGTCAAGA TAAGCTGTTG GCATTGAATC CAACCACGTA CACTATTCTA
GAAATGCTGG TCAAAAATGC CCCCGAAGTT GTGACGCGTG AAGAAATCGC ATTCCGCTTA
TGGCAAGAAA ATGAGCCAAA CAATGACGTT TTGCGCAGCC ACATTTATCA ACTGCGCGGT
CAACTCGATA AACCCTTTGA AGAACATTTA TTGAAAACCA TCCCTAAAGT CGGCTTCCGC
TTGGAGCCGG GGGCATGA
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| Protein sequence | MKRVLLVEDN REIAGMLFDY FECAGMQLDY ADNGELGLKL AMDNAFDIIL LDLMLPRMDG
LTLCNKLRDA GNNTPVLMLT ALDSRDDVLK GFQHGADDYL TKPFDLDILE ARMTALIKRY
RGTVASTKLQ YGEVSIDQKT HQAYRQDKLL ALNPTTYTIL EMLVKNAPEV VTREEIAFRL
WQENEPNNDV LRSHIYQLRG QLDKPFEEHL LKTIPKVGFR LEPGA
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