Gene VEA_003059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003059 
Symbol 
ID8556788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1613738 
End bp1614700 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content46% 
IMG OID646406150 
Product1-aminocyclopropane-1-carboxylate deaminase 
Protein accessionYP_003285684 
Protein GI262393830 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2515] 1-aminocyclopropane-1-carboxylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTAC ACTACGCGCC CTTTTTAAAT GGCAAAGGTG ACACGGTTTA TTCCGTCAGC 
ATCGACATGA AACTCTCAGA AAGTCCTATC ACCCAACATA GCTTTAATGG GCGCAAATTT
TTCCTTAAAC GTGACGACAT GCTCCACTCC CACTTTTCCG GGAACAAAGC ACGTAAGTTT
ATGACGTTAA TGGAAGAGCA AAGTCCCGAC ATCACCACGT TAATAAGCTT TGGCTCCGCT
CAATCTAATG CCATGTACTC GCTAGCGGCT CTCGCCCAGA TTAAAGGTTG GGCATTTGAG
TTTTATGTTC ATCACATTCC ATCTTGGCTA AAAAGCTCCC CCATCGGAAA CTATCGCGGC
GCTCTCGATT TAGGTATGAA AATCACCACC ATGCAAGACA TCGGTAGCGA ACTCCACCCT
AGTGAATACA TCCACCAGGT ACGAAGAGTA GATGAGTCGA CATTGCTTAT TCCAGAGGGT
GGACGTTCCC ACCTCGCTGA AGCTGGTATC AAACAGTTAG CACGAGAAAT TCTTGATTGG
ACGCGATTGA GAGGTAAAGA ACAGTTTACC GTCGCCCTGC CATCAGGCAC TGGCACGACC
GCTTTATATC TTCATAAACA TTTAAGCCCA CACGGCATAG AAGTGCTAAC TTGCCCTTGC
GTAGGCAATG CAGATTACTT AACTGAGCAG TTCAACCAGC TCGGTGAAAA CAGCCACCCA
ACCATTTTAA CCGTGCGCAA CAAACACCAT TTTGGTCGCT TGTACGAAGA AGATTACATC
ACATGGAAAG CGCTCTTTGA GCAAACCGAC CTCGAATTTG ACCTGTTATA CGACCCGTAT
ATGTGGCAAT GCCTCACCCC TTGGTTGGAA GAGAACACAG ATAAAACGGT GATTTATATT
CACCAAGGCG GGTTACTTGG CAACGAATCG ATGTTGCCAA GATATCAACG AGAATTTGAA
TAG
 
Protein sequence
MALHYAPFLN GKGDTVYSVS IDMKLSESPI TQHSFNGRKF FLKRDDMLHS HFSGNKARKF 
MTLMEEQSPD ITTLISFGSA QSNAMYSLAA LAQIKGWAFE FYVHHIPSWL KSSPIGNYRG
ALDLGMKITT MQDIGSELHP SEYIHQVRRV DESTLLIPEG GRSHLAEAGI KQLAREILDW
TRLRGKEQFT VALPSGTGTT ALYLHKHLSP HGIEVLTCPC VGNADYLTEQ FNQLGENSHP
TILTVRNKHH FGRLYEEDYI TWKALFEQTD LEFDLLYDPY MWQCLTPWLE ENTDKTVIYI
HQGGLLGNES MLPRYQREFE