| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003056 |
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| Symbol | |
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| ID | 8556785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1610981 |
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| End bp | 1612045 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646406147 |
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| Product | multidrug resistance efflux pump |
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| Protein accession | YP_003285681 |
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| Protein GI | 262393827 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCTG ACCAAAAATT CAAACACTGG ATGCGAACTT TGATTGTCCT GTTCATCGTA
CTATTTTTGT ACATTATCAT TGCTGACCGC CACGCCCCCT TAACGACCGA AGGACGAGTG
CAAGGATACG TTGTCCAAGT CGCGCCCGAG GTATCTGGTA AAGTGACCGA CGTTCTCATC
GAGAATAACC AGTCCGTTCA AAAAGGCGAT GTGTTGTTTA CGATTGATGA TCGTAAATAC
AAGATAGCAC TTGAACAGGC GGAGCTGTCT CTACAATCCG CTTATGAAAA AGAAGCAACG
CTGTATTCTC AACGCGAAGC CGCTCTTGCC AATATTGCCC GCGCACAAGC GACATTTGAT
AATGCACACC GCGAGTACAC CCGCTTACTG ACACTATCGA AGCAGAAAGT CATCTCTCAA
TCGACACTCG ATAATGCCTT TGCCCAAAAT CAGGTATCAC GTGCAGCGCT TAAAGCGGAA
AGACAAAACT TAAAAGTCAT TGAGGCGCAA TTAGGCGTTC AAAAAGGTCA AAGCACCGCC
GTTCGAATTG CCAAAAACGG CATCGAAAAG GCGCAACTTG ATTTGGCAAA TACCGCGGTA
CTCGCTCCCA GTGATGGTGT CGTGACCAAC CTGCAACTAG AAGTTGGCAC GATGGCAAAC
ACCAACATGC CATTGCTGAC ATTTGTACCA ACAGGATCAC TCTGGGTAGC CGCTGATTTT
CGTGAAAAGT CCGTCGCGAA CGTAGACAAG ACTTTCCACG CCCTGGTCAC ATTTGATGCC
AACCCAGGTT CGGTGTACGA CTTTGATTTA GCTAGCCGCG ATTACGGTGT AGCAGCCGCA
CAACAAACGC CTAATGGCGC ACTAACCAAA GTGGAAGTAA ACAACCGCTG GGTACGTGAT
GCGCAGCGTA CACGAGTGAA CCTAACCAGC AGCGAAGAGT TACCACCAGC ACTGTTTGTC
GGCTCTCGTG CTACCATTGT TTTGTACCCA GACAACAACA TTTTCTGGCA GTGGATGGCG
CAAGCACAGA TTCACCTCGC AAGCTGGTTC CACTTCATTT ACTAG
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| Protein sequence | MTADQKFKHW MRTLIVLFIV LFLYIIIADR HAPLTTEGRV QGYVVQVAPE VSGKVTDVLI
ENNQSVQKGD VLFTIDDRKY KIALEQAELS LQSAYEKEAT LYSQREAALA NIARAQATFD
NAHREYTRLL TLSKQKVISQ STLDNAFAQN QVSRAALKAE RQNLKVIEAQ LGVQKGQSTA
VRIAKNGIEK AQLDLANTAV LAPSDGVVTN LQLEVGTMAN TNMPLLTFVP TGSLWVAADF
REKSVANVDK TFHALVTFDA NPGSVYDFDL ASRDYGVAAA QQTPNGALTK VEVNNRWVRD
AQRTRVNLTS SEELPPALFV GSRATIVLYP DNNIFWQWMA QAQIHLASWF HFIY
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