Gene VEA_003016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003016 
Symbol 
ID8556746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp1567042 
End bp1567734 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content45% 
IMG OID646406109 
ProductRecA/RadA recombinase 
Protein accessionYP_003285643 
Protein GI262393789 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0604638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGATA TTATTCAGCA CTTAAAAAGC CAGCACCTTG TTTGGCAAGC AAATTTAACG 
AAAACAGATC CTCAGCAGTT GCGGACTAGT TCCGGGTTTT CTGAATTAGA TGATTTGCTC 
GGCGGAGGCT TTCCACCTCA TGGCGTAGTG GAGATGGAAT CTATTGGTAG TATTGGTGAA 
TTGCGTTTGC TCGCTCCTTA TTTAAAAGCC ACCCAGACCA ATGGTGTGAC TGCATTTATT 
CAACCTCCCG CGTTAGTGAA TTCTCTGTTC TTACACTACA TCGGTTTGGA TATAAACCAA 
GTGTGGGTCG TTAATCCAGC TCATCCCAAA GATGCTCTTT GGGCTGCAGA GCAATGTCTG 
AAAAGTGGGG TATGCAGTAA TGTTTTGTTA TGGCAAGAAG AGCTTGAAAT ACATCAAGTG 
AAACGCTTAC AGGTAGCGAG TGAGCAAGGC ACTTGTCCTC TATTCATGCT CAAGCCTAAT 
ATGACAAACC GCTTGTCTTT ACCTGTTTCA TTAAGCCTAA AGCTGCAAGG TAATGTACAA 
GGCGTCAAAG TGGAAGTTCT CAAGCGAAAA GGCGGTTGGA GCAAAGGCAG TGTCGATATC 
AGTTTCCAAC ACCACTACCC ACAACTGGTA ATGCCAAGCA CGACTCACAT TCCATCAACG 
GTGGTCAATT TCCCATTGGC GAACCAAGGT TAG
 
Protein sequence
MHDIIQHLKS QHLVWQANLT KTDPQQLRTS SGFSELDDLL GGGFPPHGVV EMESIGSIGE 
LRLLAPYLKA TQTNGVTAFI QPPALVNSLF LHYIGLDINQ VWVVNPAHPK DALWAAEQCL 
KSGVCSNVLL WQEELEIHQV KRLQVASEQG TCPLFMLKPN MTNRLSLPVS LSLKLQGNVQ 
GVKVEVLKRK GGWSKGSVDI SFQHHYPQLV MPSTTHIPST VVNFPLANQG