Gene VEA_002778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002778 
Symbol 
ID8556506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1310073 
End bp1310648 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content44% 
IMG OID646405869 
Productphosphoheptose isomerase 
Protein accessionYP_003285405 
Protein GI262393551 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID[TIGR00441] phosphoheptose isomerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCATG ATCTGATTAG AAGTGAATTA AACGAAGCTG CTGAAGTGCT CAACAAATTT 
TTAAGCGATG ACCATAACAT TGCGCAAATC GAAGCAGCGG CGAAAATGAT TGCTGACTCA
TTCAAGCAAG ATGGTAAAGT ACTGTCATGT GGTAACGGTG GTTCTCACTG TGATTCGATG
CACTTTGCCG AAGAGTTAAC AGGCCGTTAC CGAGAAAACC GTCCTGGCTA TGCTGGTATT
GCTATTTCAG ATCCAAGCCA CCTTTCTTGC GTGAGTAATG ACTTTGGTTA TGACTTCGTG
TTTTCCCGTT ATGTAGAAGC GGTTGGCCGA AAAGGTGACG TCCTGTTTGG TCTGTCGACT
TCAGGTAACT CAGGTAACAT CCTTAAAGCG ATTGAAGCGG CGCAAGCGAA AGGCATGAAG
ACGATTGCGC TAACAGGCAA AGATGGCGGC AAAATGGCAG GGCTTGCCGA TATTGAAATC
CGCGTGCCAC ACTTTGGTTA TGCAGACCGT ATTCAGGAAA TTCATATTAA GATTATTCAT
ATCATCATTC AGTTGATTGA AAAAGAGATG GAATAG
 
Protein sequence
MYHDLIRSEL NEAAEVLNKF LSDDHNIAQI EAAAKMIADS FKQDGKVLSC GNGGSHCDSM 
HFAEELTGRY RENRPGYAGI AISDPSHLSC VSNDFGYDFV FSRYVEAVGR KGDVLFGLST
SGNSGNILKA IEAAQAKGMK TIALTGKDGG KMAGLADIEI RVPHFGYADR IQEIHIKIIH
IIIQLIEKEM E