| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002701 |
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| Symbol | |
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| ID | 8556429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1229826 |
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| End bp | 1230485 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405792 |
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| Product | putative transcriptional activator ChrR |
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| Protein accession | YP_003285328 |
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| Protein GI | 262393474 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAAAC ACCCAGATAA CAGCTTGTTA GAAGCATACG CTTCGGGAAG CATTGATGCA
GTTTCTGGTC TTGTGGTCGC AACCCATTTA GAAACATGCA CCAAGTGCCG AGCTTATGTG
AACCAAGTCG AAGCCAGCCA AGCGAATATC GTGAGCGACA TCCCCTCTGA ATATGTCCCT
GAATTCGACG ATATGTTCAA TGATATTATC AATGCGGAGC CAGCGACAGA TAACATCGTT
ATCCGAGATC CTGCCGCAGT GAATGTTGCA GGAAAGAGCT TTGAGCTTCC CAAAACCTTA
GCGCGTTTCT CTGACCTCGT AGGGTCATGG AGAAGTTACG GAGGCAAGGT TTTCAGTGCT
CAGATTGATC TAGGGGAAGA TGCTCGTGTT AGCTTAATGT ACATCGGAGA AGATGTGCAA
ATCCCTCAAC ATACGCACAA AGGCTTAGAA TCTACATTGA TCCTACATGG TGGGTTTAGT
GATGAGGATG GCCAATATGA AGAGGGCGAT TTGATGATTC GAGACGCGTC AGTGAAGCAC
AGCCCTTACA CTAAAGTCGG AGAAGATTGC TTGTGTTTAA CCGTATTGAC CGAGCCGATG
ATCTTTACTC AAGGTGTGGC ACGTATATTT AATATGTTTG GCAAAGGGCT ATACCCATAG
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| Protein sequence | MNKHPDNSLL EAYASGSIDA VSGLVVATHL ETCTKCRAYV NQVEASQANI VSDIPSEYVP
EFDDMFNDII NAEPATDNIV IRDPAAVNVA GKSFELPKTL ARFSDLVGSW RSYGGKVFSA
QIDLGEDARV SLMYIGEDVQ IPQHTHKGLE STLILHGGFS DEDGQYEEGD LMIRDASVKH
SPYTKVGEDC LCLTVLTEPM IFTQGVARIF NMFGKGLYP
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