| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002652 |
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| Symbol | |
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| ID | 8556380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1167262 |
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| End bp | 1168275 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646405743 |
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| Product | Flp pilus assembly protein TadD |
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| Protein accession | YP_003285279 |
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| Protein GI | 262393425 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGATTA AGAAATACGT CATCATCTCG TTGTTGGTGC TTACCGCATG TTCAACAACT
GAACAGTCAT CAGACTTCGA TTCAACGCTG TACTCAGGTA AGCCCGTTGA GTCACTCACC
AATGATGAAC CTCCAAAAAC AGAGGAAGAG GCAATCTCTC GAGGGGATAT TGCATTAAGC
AATAAAAATG TCGACTTAGC GTTGTATGAA TACATTCGCT CGCTCTCTTT CCCGAATGCG
GTCCATAAAG ACAAAACGTT ATACACCGTG GGGCGTATCC ATTTGGCAAG AGAGAATTCA
GAACTTGCGG ATAAATCATT TCGAGCATCT TTAGCAGAGA ACCCTGATCA CATTGGTTCC
CTCACAGAAC TTGGCACTCT GTATACGAAA CGTGGCGAAA AGGACGTCGG GAAGAGTTAC
TACATCCGCG CTTTGAATGC TGATCAAATT CGTATGGATG GCGATCCGAT TATCACCAAA
GACAACATTA CAGCTGAGAG CGTTGCAACG TATCGCTATG ATGATAAATC ACCGGTTTCT
GCTTACTCTG GTCTAGGTGT ACTTTACGAC ATTCGTGGCG ACCACGATAT TGCGCAGGCA
TTAATTCGAA AAGCGTTGGA TATTGATTCA AGAAACGTCA ATGCTTTAGT CAGCCTAGGC
TATTCCTACT ACATGGAAAA AGCTTATTCA AAAGCGGCGC ACTTTACTCA AGCTGCGCTG
AGCATTAAGC CGGGGGATGA AAAGGGAATC AATAACTTGG GTCTCATTGC ACTGGCAAAA
GATCAACCAC GACAAGCTCT GAGTATTTTT AGTCGACACA TGACAGAGCC GGAAGCACTC
AATAATGTTG GTTACTTCTT GATCCTTCAA GGCAAACCAG GCGAGGCGAT TCCTTATCTA
CAACAGGCTA TTGATAAGAA TCCTGCCTAC TATGAACTGG CAAATAAAAA CTTAGAGCGA
GCATTAGCAA TGGTCAGAGA GCGAGGGGAT ACCTCTACCG CGCTTCTCCA ATAG
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| Protein sequence | MWIKKYVIIS LLVLTACSTT EQSSDFDSTL YSGKPVESLT NDEPPKTEEE AISRGDIALS
NKNVDLALYE YIRSLSFPNA VHKDKTLYTV GRIHLARENS ELADKSFRAS LAENPDHIGS
LTELGTLYTK RGEKDVGKSY YIRALNADQI RMDGDPIITK DNITAESVAT YRYDDKSPVS
AYSGLGVLYD IRGDHDIAQA LIRKALDIDS RNVNALVSLG YSYYMEKAYS KAAHFTQAAL
SIKPGDEKGI NNLGLIALAK DQPRQALSIF SRHMTEPEAL NNVGYFLILQ GKPGEAIPYL
QQAIDKNPAY YELANKNLER ALAMVRERGD TSTALLQ
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