| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002588 |
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| Symbol | |
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| ID | 8556314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1092278 |
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| End bp | 1093303 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646405677 |
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| Product | ribosomal RNA small subunit methyltransferase C |
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| Protein accession | YP_003285215 |
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| Protein GI | 262393361 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.328376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCTT ATATCGCTCC TAGCCAAATA GCTCAGCGTC AGCTCGAGTA CTTCAACGGA
AAACATGTTT TAGTTGCAGG TGAAGTCGAA GATCTCTTTA CACTTGAACT GACCAAACAC
TGTGAATCTG TAGAAGTCTT CACATCAAAC TACAGCTTCT ACCGTCAAAT TCGCACTCAT
AACAAGGTTA AAAGCCATTT TGGTTCTGAG TTTAATACTG AGACACAAGC AGACATGGTG
CTTTTGTACT GGCCTAAAGC CAAAGCCGAA GCCGAATACC TTCTGGCGAT GTTGATGGCG
AAACTAGGTG TGAACACTGA AATTGTAGTG GTTGGCGAAA ACCGCTCAGG TGTTAAAAGC
ATCGAGAAGA TGTTCAAAGA GTATGGCCCG GTCAATAAAT ACGATTCCGC TCGTCGCTGT
TCATTTTACT GGGGCACTTG CCTCAATGAA CCAAAGCCGT TCAATCAAGC AGACTGGTTT
AAAACCTATA CGGTCACACT TGGTGAGCAA TCACTGACTG TTAAGAGTTT GCCTGGAGTA
TTCAGTCATG GCGAATTCGA TTTAGGTAGC CGCCTATTAC TCGAAACCCT ACCTACTCTA
TCAGGTAAAG TCCTCGACTT TGGATGTGGT GCTGGGGTAT TAGGTGCTTT CATGGCAAAA
GCCAATCCAG AAATTGCGAT TGAGATGTGT GACATTAACG CGTATGCCAT CACATCGAGT
CAAGCCACAC TAAAAGCCAA TGGATTAACC GGCCATGTAT TCGCCTCTGA TATTTACTCA
GACACTGCCG ACGATTATCG TTTTATCATT AGTAACCCAC CTTTCCACAG TGGTTTAGAT
ACGAACTACA ACGCAGCAGA AACACTATTG GGTCAGGCTC CAAAGTATCT AGATAGCCAT
GGTGAAATGA TCATTGTCGC GAATAGCTTC TTAAAATATC CACCAATTAT TGAGCGAGCG
TTTAATAATT GCGAGACGCT AAATAAGACC AATAAGTTTT CTATCTACTA CGCGAAAAAG
TCATAA
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| Protein sequence | MSAYIAPSQI AQRQLEYFNG KHVLVAGEVE DLFTLELTKH CESVEVFTSN YSFYRQIRTH
NKVKSHFGSE FNTETQADMV LLYWPKAKAE AEYLLAMLMA KLGVNTEIVV VGENRSGVKS
IEKMFKEYGP VNKYDSARRC SFYWGTCLNE PKPFNQADWF KTYTVTLGEQ SLTVKSLPGV
FSHGEFDLGS RLLLETLPTL SGKVLDFGCG AGVLGAFMAK ANPEIAIEMC DINAYAITSS
QATLKANGLT GHVFASDIYS DTADDYRFII SNPPFHSGLD TNYNAAETLL GQAPKYLDSH
GEMIIVANSF LKYPPIIERA FNNCETLNKT NKFSIYYAKK S
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