Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002474 |
Symbol | |
ID | 8556190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 956475 |
End bp | 957341 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646405553 |
Product | small-conductance mechanosensitive channel |
Protein accession | YP_003285101 |
Protein GI | 262393247 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGTG AATCGGTGGG TATCGATACC ACTTTAACGG ATGGTCTAAC TCAGGCTGAA ACTTGGCTGA CAAACAACTC AGATCTACTG GTTCAGTACG GTGTGAACAT TATCTCTGCG CTGCTTATTC TGTTTATCGG TAATATTATC GTTAAAGCAG TCGCTGGTAG TGTTTCTAAA GTACTAGAAA AGAAAAACAT GGATAAGGCT GTCGTTGAAT TTATTCACGG TCTTGTTCGT TACTTGCTAT TTGTAATCGT ACTTATCGCA GCTCTTGGTC GATTAGGCGT TCAAACCGCT TCAGTCGTGG CTGTAATCGG TGCGGCAGGT CTTGCTGTTG GTCTTGCGCT ACAAGGTTCA CTATCAAACT TTGCAGCTGG TGTACTCATT GTTGCGTTCC GTCCATTCAA ATCTGGCGAC TACGTAGAAA TTGGCGGTGT AGCGGGTAGT GTTGAAGCAA TTCAAATCTT CCAAACTGTT CTAAAAACAC CAGACAACAA GATGGTTGTT GTGCCTAACT CGTCAGTAAT CGGTGGTGCA ATTACTAACT ACTCTCGTCA TGCAACGCGA CGTGTCGACT TAGTGATTGG TGTGTCATAC AAAGCGGATC TTAAACTAAC GAAGAAAGTA ATTCGCGAGA CGCTAGAAAA AGATCCGCGT ATCTTGAAAG ATCCTGATAT CACAATCGGC GTACTTACGC TGGCAGACTC TTCAGTAAAC TTTGTGGTTC GCCCATGGGT GAAAACTGCA GATTACTGGG GCGTATACTT TGATGCAATG CAAGGTATTA AAGAAGCATT GGATGAAAAT GGTATCGAAA TTCCATTCCC ACAAATGGAT GTTCATCTGA ACAAAATCGA CGCTTAA
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Protein sequence | MAGESVGIDT TLTDGLTQAE TWLTNNSDLL VQYGVNIISA LLILFIGNII VKAVAGSVSK VLEKKNMDKA VVEFIHGLVR YLLFVIVLIA ALGRLGVQTA SVVAVIGAAG LAVGLALQGS LSNFAAGVLI VAFRPFKSGD YVEIGGVAGS VEAIQIFQTV LKTPDNKMVV VPNSSVIGGA ITNYSRHATR RVDLVIGVSY KADLKLTKKV IRETLEKDPR ILKDPDITIG VLTLADSSVN FVVRPWVKTA DYWGVYFDAM QGIKEALDEN GIEIPFPQMD VHLNKIDA
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