Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002469 |
Symbol | |
ID | 8556185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 949334 |
End bp | 950227 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646405548 |
Product | iron-regulated virulence regulatory protein IrgB |
Protein accession | YP_003285096 |
Protein GI | 262393242 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.332225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGACT TAGCATCAAT TCGAGCCTTT GATGCGCTCA ATCAGCATAA GAGTTTGACC GCCGCTGCCA AGGCCCTTAA CCAGCCTAAA TCAACGCTGA GTCGTCGCTT AGCACAATTA GAAGAAGATT TCGGTCAGGC TCTCACCGCA AGACAAGGTA ACCGATTAGT TCTGACAAGG GCGGGAGAAA TTTTTGCCCA CTACAGTCGC CAGATTCTTG AGCTAAGTGA AGAGAGTTAT GACGCACTTC AAGGTTTAAC AAACCAAGTT TCAGGGCCGC TGCATATTGT TTGTCACACA GCATTAGTTA GAAGTTGGCT AGGAGGTGTG CTCAACGGCT TTCTTGCCGA TAATCCTGAC GTTAGGGTTC AACTTACCAG TGACTTTTCT GAAGCGCACC ATGACCCAGA TTTGTTCATC TGGCTCGGTG AGCGTAAAGA TCTCGATTGG CGCAAAGAGG TATTAGGCTC ATTTCGTTAC ACGCCCTTTG CCTCTCCAGC TTATCTTGAA CAACACGGTT CGATCCTGCA CCCCAAAGAG CTTGAAGCGC ATCCGTGGAT CGATTTTGGC TCGGTACAAG AAAATGGATT GATGCTCACA CACCCTCAAC ACGGTGAGTT CTTTTTAGAG CCATTTGTGA GTCGCTTATA CAGCGACAAC ATCGCAATGC AGATCGACAG CATCGCGAAT GGTCATGGTA TTGGACTGTT GCCAACTTGG ACAGCAAGCG GCTACGAGAA ACATCATCCG GGTCGAATCA CACCTTGCTT AGAAGGTTGG CTTTCAGAGC CCATCTCCAT TAACTGCTAT ACGCCTGCAG GAAGACCACC ACTGCGCTTA TCCGTACTTT TAGACTGTAT TCACCAAAGC ATTCCACAAG GTTGGAAAAC CTGA
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Protein sequence | MHDLASIRAF DALNQHKSLT AAAKALNQPK STLSRRLAQL EEDFGQALTA RQGNRLVLTR AGEIFAHYSR QILELSEESY DALQGLTNQV SGPLHIVCHT ALVRSWLGGV LNGFLADNPD VRVQLTSDFS EAHHDPDLFI WLGERKDLDW RKEVLGSFRY TPFASPAYLE QHGSILHPKE LEAHPWIDFG SVQENGLMLT HPQHGEFFLE PFVSRLYSDN IAMQIDSIAN GHGIGLLPTW TASGYEKHHP GRITPCLEGW LSEPISINCY TPAGRPPLRL SVLLDCIHQS IPQGWKT
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