| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002380 |
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| Symbol | |
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| ID | 8556075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 846114 |
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| End bp | 846875 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646405438 |
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| Product | MSHA biogenesis protein MshO |
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| Protein accession | YP_003285007 |
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| Protein GI | 262393153 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.197407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAA GAGGCTTCAC TCTCATAGAG CTCGTGCTGA CCATTGTTAT TGGTAGCATC
ATCATGCTGG GGGTTGCAGG TTATGTTCAA GTTGGGATGA AAGGGTATGT TGATGCTAGT
TCAAGACAAA GAATTCAGAC CCAAGCTCAA TTTGTGCTAG AAAAAATGGC GCGTGAAATT
AGACACGCCG TTCCCAATAG TTTTGCAATG ACAAACACGG TTGACGAATC CTGCCTGTCG
TTTGTTCCAA CTTTAAATTC CGGTTATTAT TTTCAAGAAC CAACCAGCAA CGATCTGCTT
TTTATCACTG GGGAAAACGT TTCAGGAAAT ACATTAAAAG CTTCCGACGG GATACGCTTT
GTTATTAATC CTACACGCTA TGACGATTTG ATATCTGGCG CTGTGAGTAA TCACTTAATT
GATAGCGATC TTGCTTTAAA TGGTGATGAT AGCAATGGTA ATGCCGACTT TTATCGCTAT
AGCTTAACGG CGTCTCTACC TAGCGATTCG ATCGCTCATC GTATTTATCT ATATCAGTTA
GCAACCAAAG TTGAATACTG CATTGTCAAA ACAGGTGTGC GTAGTAACCA CTTAACTCGC
AATGGCACTG TTGTTGAAAA TATCGTGGCA GATGAAAGTC AATTTGATTA CACGAATGTG
AGTTTACAGA CTGGTGGGAT TGTTTATCTC AAATTTGCTT TTGAACAAAA TGGTGAAGTT
AGTACCTACC AACAAGATGT GCAGGTGTTA AATGTCCCAT AA
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| Protein sequence | MSQRGFTLIE LVLTIVIGSI IMLGVAGYVQ VGMKGYVDAS SRQRIQTQAQ FVLEKMAREI
RHAVPNSFAM TNTVDESCLS FVPTLNSGYY FQEPTSNDLL FITGENVSGN TLKASDGIRF
VINPTRYDDL ISGAVSNHLI DSDLALNGDD SNGNADFYRY SLTASLPSDS IAHRIYLYQL
ATKVEYCIVK TGVRSNHLTR NGTVVENIVA DESQFDYTNV SLQTGGIVYL KFAFEQNGEV
STYQQDVQVL NVP
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