| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002378 |
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| Symbol | |
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| ID | 8556073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 845093 |
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| End bp | 845554 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646405436 |
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| Product | MSHA pilin protein MshC |
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| Protein accession | YP_003285005 |
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| Protein GI | 262393151 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0204489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTCGC GCTCAACGAT ATCAGGTTTT ACTCTCATTG AGCTGATCAT GGTAATCGTC
ATCCTTTCAA TATTATCGCT TTACGCGTCC AGTCGATTTA TGCGCACTGG AATTTCTGCC
GCAGCAATTC AAGATCAAGT CATTTCTGTT GTTCGCCAAG TCCAGGTGAA TCGCATGCAA
TCAAATGTCA GTAGTGCGGT AGGAAATAAC GATTTTATTC TATCCATAGC AACCAATTGT
ATCGGTTCAA AAGCCTCTTG CTCATCTCAG TCCAGTAGTC GTAGTGATTG GGTCGAAGAC
AGCAGTGTTA CTTTTTCTCC TGTTCAAGAG GTTAAATTTG ATCTTCTAGG AAATCCAACC
CCTTCTTCGG TCACTATCTC TATTAGCGAA AACAATAGCT CTCAAACTTG TACGGTCACA
ATTAATGAGC AAGGCTACGT AAGTAAAGGT GGCTGTTTAT GA
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| Protein sequence | MKSRSTISGF TLIELIMVIV ILSILSLYAS SRFMRTGISA AAIQDQVISV VRQVQVNRMQ
SNVSSAVGNN DFILSIATNC IGSKASCSSQ SSSRSDWVED SSVTFSPVQE VKFDLLGNPT
PSSVTISISE NNSSQTCTVT INEQGYVSKG GCL
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