Gene VEA_002366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002366 
Symbol 
ID8556061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp835845 
End bp836495 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content44% 
IMG OID646405424 
ProductMSHA biogenesis protein MshJ 
Protein accessionYP_003284993 
Protein GI262393139 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAT TCTGGATCTC ATTAGAAGAG CGCTTTGGCG AAATGAGCGC GCGTGAAAAA 
GTGCTTATCG CGCTGTGTGG TTTAGTTGTC GTGATCATGT TGCTTTTTAC GCTGGTACTG 
GAACCAAAGC TTAACGAGAT CATCAGTAAT GAGAGGCAAC TAAGCAATTT AAAGCAAGCC 
AATCAAAAGA TTGAAATCGA CACGCTACGT ATTCAAGCGC AGCTGAAGAA AGATCCAAAC 
GCTGAGATTG ATCGCGCGAT ATCTAACCTG CTAACAGAAA GTCAGCACCT TTCGATGCAG 
CTAGCGGAGA TCATCGAACA CCTTATTACA CCTTCGCAAA TGGCTGAGCT GCTGGAAAAT 
GTATTAGAGC AGCAAAGTGG CATTCACCTT TTGTCTTTGC AAACTTTGCC ATCTGAGCCA 
ATTACGGAAG ATAAAGAAGC ATCGCAATAC TCTGGTTACT ACGTGCACCC TGTACGCATG 
GAGCTGATTG GCGACTACTT TTCTATTGCC AATTATCTAA ATAAGTTGGA GAGCCTTCCT 
GCCAGTTATT ATTGGCGCAG CTTTAGTTAC AAAGTCGAAG AGTACCCGAA AGCGAAGCTT 
GTGTTGGAAG TCTACACACT AGGATCTCGA GAGGAGTTTA TTGGTGGTTA A
 
Protein sequence
MNEFWISLEE RFGEMSAREK VLIALCGLVV VIMLLFTLVL EPKLNEIISN ERQLSNLKQA 
NQKIEIDTLR IQAQLKKDPN AEIDRAISNL LTESQHLSMQ LAEIIEHLIT PSQMAELLEN 
VLEQQSGIHL LSLQTLPSEP ITEDKEASQY SGYYVHPVRM ELIGDYFSIA NYLNKLESLP 
ASYYWRSFSY KVEEYPKAKL VLEVYTLGSR EEFIGG