| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002359 |
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| Symbol | |
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| ID | 8556054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 824829 |
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| End bp | 826514 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646405417 |
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| Product | lipid A core-O-antigen ligase |
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| Protein accession | YP_003284986 |
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| Protein GI | 262393132 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGGCAA TGCACTTTTT CATGCCCAAC CCCGGCGGTT CAGGACTTTC ACTTTCCTTC
AATGCGACAA CTTGGATTGC TTTTAGCTTT GCATTAGGCA TTGGGTGCTA CCAACTCGCG
AATAATCGAG CGCTACGTTA CTCAAAATTA ACCATCGGCT TGTTCATTAG TGCTCTTATC
ATGACGGTAC CCATTCTGTA CCCAAATGCG AATAGCAGTT TGGCAGCCAA CAAGCTCATT
GGTCTGTGGT GTGGCGTCCT GTTTTTTATT GTCTTACAAC AATTTCATTT CAGTAATAAA
CATCGCCAAC GCCTGTTATG GTTCATTGTC CTTGCGGTTG TTATCGAAGC CATTTTTGGT
CTGACACAAT ATCTGTATCT CAAACCAGGC AATCCGTTTG GCTACGACAC GATGGCCAAT
CGTCCTTATG GTATTTTCCA ACAGCCTAAT GTAATGGCCA GTTTTCTTGC GACAGGATTG
GTGATTGCCA GCTATTTACT TGCACGTCAG CCCTACAAAT ACGACCGTAA GTTAAGCGAT
GTTTATCTTC TCTATGCAGT GCCAGTTTTA ACCTTACCAT TGATTGTGGC GTTGGCTTCA
CGCACTGGTT GGTTAGCATC GATCATCGCC GTGTTGTTGG TCATCCCATA CATGTATCGT
TTTGCGACCA AAGGGCGCTT TATCCGCTGG GTTACGTCGC TTGTCACTGG GCTCGCACTC
TCAGTCGTTG TCATGTATCT TGCCTTTCCT GATGGAAGTG GGTTAGCCGC AGAAAAAGTA
AACATGGAGT CTCCTCGAGC GTATACTTTT CCGCAAACAT TAGACATGGT GATTGAAAAG
CCTTTTACTG GCTATGGATA TGGCAAGTTT GAATCTGAGT ACATGCTGTA TACGGCTCGT
CAACATGCCC TAAATGAGAA TTACCCAGCT GGTTTGCCAG CCATGGATCA TCCGCATAAC
GAGCTACTTT ACTGGGGAGT AGAAGGTGGT TTGCTGCCAA TACTCGGCAT CTTCTTAGCG
ATGGCACTGG TACTGTATCG AATCTATCAA GCCAAACGCG GAACTCGTCT TGCGTTGCTG
GCCTTGTTTA TACCTATCGT ATTGCACTCA CAACTGGAAT ACCCTTTCTA CCACTCTCTC
GTACATTGGT TGATCTTCGT TATCCTGCTG TACTGGGTCG ATCAGCGCGT CTCTCGTTAT
CGACAAGTCG GCTTTAGTAA TGTGACCAAA AGCTTGCTGC GAGTCTTTAG TTTGGTACTT
CCCGTTACGT TTACGTTTTA CATGGTAAGC GCATTGCATA CGAACTATGT ATTGACGAAG
TTTGAGGCCA CTAGGCCAAC TAACCCTGAT ATTCTGAATC AAGTCAGTAA CCCTGTAGTT
TGGAAAGACA GGTTTGATTG GGATGTCTAT AGCACGTTTT TAAACATTGG GCTGTACCAA
CAAGACGCAA CCTTGATTCA GCCTTATATC GATTGGTCGC TAAAAATCAT CAAAGATAAG
CCTCGCCCTG CATTTTATAA TAATTTGATT TTGGCCTACC AAGGCTTAGA TGACTCAAGT
AAAGCGGAGC AAATCAGAGC TGAAGCGCAG TTTTTGTTCC CGAAGATTGA TTTCAGTGAC
GTCAATTACC GACCACCTTC TCAAGCAATC TCTGCCTCAC CAGCACCCAC TTCAGGTGCA
GAGTAA
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| Protein sequence | MLAMHFFMPN PGGSGLSLSF NATTWIAFSF ALGIGCYQLA NNRALRYSKL TIGLFISALI
MTVPILYPNA NSSLAANKLI GLWCGVLFFI VLQQFHFSNK HRQRLLWFIV LAVVIEAIFG
LTQYLYLKPG NPFGYDTMAN RPYGIFQQPN VMASFLATGL VIASYLLARQ PYKYDRKLSD
VYLLYAVPVL TLPLIVALAS RTGWLASIIA VLLVIPYMYR FATKGRFIRW VTSLVTGLAL
SVVVMYLAFP DGSGLAAEKV NMESPRAYTF PQTLDMVIEK PFTGYGYGKF ESEYMLYTAR
QHALNENYPA GLPAMDHPHN ELLYWGVEGG LLPILGIFLA MALVLYRIYQ AKRGTRLALL
ALFIPIVLHS QLEYPFYHSL VHWLIFVILL YWVDQRVSRY RQVGFSNVTK SLLRVFSLVL
PVTFTFYMVS ALHTNYVLTK FEATRPTNPD ILNQVSNPVV WKDRFDWDVY STFLNIGLYQ
QDATLIQPYI DWSLKIIKDK PRPAFYNNLI LAYQGLDDSS KAEQIRAEAQ FLFPKIDFSD
VNYRPPSQAI SASPAPTSGA E
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