| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002352 |
|---|
| Symbol | |
|---|
| ID | 8556037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 803697 |
|---|
| End bp | 804476 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 646405400 |
|---|
| Product | phosphoadenylyl-sulfate reductase (thioredoxin) |
|---|
| Protein accession | YP_003284979 |
|---|
| Protein GI | 262393125 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin)
[TIGR02057] phosphoadenosine phosphosulfate reductase, thioredoxin dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000919211 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGATT CTGTAGCATC CAGGCTTGAG CTTACAGAGT TATTGACATT AACAAAGACG
GAGCAAATCC TCCGTCTTGC TCAAATTAAT GTCGAGCTCG AAAAGCTTTC GGCACAAGAT
AGAGTAAAGT GGGCTTTAGA AAATCTAGAG GGCGAGTTTG CGGTTTCTTC TAGTTTTGGT
ATTCAAGCCG CGGTTATGCT TCATTTAGTG ACTCAAGTCA AAGCGGATAT CCCCGTCATT
CTAACCGATA CAGGATACCT GTTTGCTGAA ACCTATCAAT TCATTGATGA GCTGACAGAT
GCTCTCAACC TAAACTTAAA AGTTTATCGA GCGAAAGAAA GTGCGAATTG GCAAGAGGCT
CGATATGGAA AGTTATGGGA GCAGGGTGTA GAGGGAATTG AAAAATACAA CAAGCTCAAT
AAAGTGGAGC CAATGCGTCG AGCGCTAAAA GAGCTTAATG TTGGAACGTG GTTCTCTGGA
CTGCGTCGAG AGCAAAGTAA ATCTCGTGCA GGTTTACCGA TTCTATCAAT TCAGAACGGT
GTGTTTAAAT TTCTACCAGT AATTGATTGG ACTAATAAAG ACGTTCATTA CTACTTAGAA
CAACACGGCC TTAAATACCA CCCATTGTGG GATGAAGGTT ACCTTTCAGT TGGTGATACA
CATACCACTC GTAAATGGGA GCCGGGAATG TCAGAGGAAG AAACTCGATT CTTTGGCTTA
AAGCGAGAAT GTGGCCTACA CGAAGATGAT GGTTCTGAAC AAGATGGGTC TGGCATATAG
|
|---|
| Protein sequence | MLDSVASRLE LTELLTLTKT EQILRLAQIN VELEKLSAQD RVKWALENLE GEFAVSSSFG
IQAAVMLHLV TQVKADIPVI LTDTGYLFAE TYQFIDELTD ALNLNLKVYR AKESANWQEA
RYGKLWEQGV EGIEKYNKLN KVEPMRRALK ELNVGTWFSG LRREQSKSRA GLPILSIQNG
VFKFLPVIDW TNKDVHYYLE QHGLKYHPLW DEGYLSVGDT HTTRKWEPGM SEEETRFFGL
KRECGLHEDD GSEQDGSGI
|
|---|
| |