| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002273 |
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| Symbol | |
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| ID | 8555958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 725431 |
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| End bp | 728385 |
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| Gene Length | 2955 bp |
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| Protein Length | 984 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405322 |
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| Product | predicted extracellular nuclease |
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| Protein accession | YP_003284901 |
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| Protein GI | 262393047 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACGT TAATCAAACC CTCAATACTC GCACTAACCA TCGCCAGTGC ACTTAGCGCA
AACGCGAACG CAGAGATTAT TATTTCCCAG TATGTGGAAG GCGGCGCTTA TAATAAAGCG
GTCGAGATCG CCAATACAGG TGATACTGCG GTGACACTCA CAGGCTATGA ATTAGCAAAA
TCTTCGAATG GTGGCGGCTC GTGGGGCAGC ACTCTTGATC TTAGTGACGT AACGTTACAA
GCGAAGCAAG TGTATGTGCT TGCTCATGGC GATGCGAGCG AAGCAATAAA GGCGGTTGCG
GATTACACTG ATAAAAATGT AGCGAACTTT AACGGCGACG ATCCGTTGGC ACTTCTTAAA
GATGGGGAAG TGCACGATAT ATTAGGTGTG ATGGGGGACG TGGATTTCGC TAAAGACACC
ACGTTAGTTC GTAACAGTGA TGCGCTTACA CCTTCAACTA CCTACCAATC CACTCAGTGG
ACAGCCTTAC CTAAAGATAA TATTGATGGT TTAGGGGAAT TAAATACAAC TGAGCCACCT
GCGCCATTTG CTTGTGAAGT AGATGGACAA GAACCAGCCT TTACCACCAT CCAAGAGATT
CAAGGTGAAG GTGCTTCTTC TCCATTTATT GATGGTTACC CTTACATCAC GACCGAAGAT
CACTTCGTAA CTGGTGTGGT CAGTGCGGTA ACAACAGGCT TAACTAAAGG CTTCTACCTG
CAAGCACTTG AGAATGATGG CAACGACAAG ACATCTGAAG GTTTGTTTAT TCACACCGAT
GTTGCAGATA CAGAGCTGAA AGCTGGTGAT GTTGTTTGTG TGAAAGGGAA AGTACAAGAG
TACTACAGCA ACACTCAGCT TTCTTCTGAT GCAAACAGTT ATGTAAAAAC AGGCACATCA
AACGCCTCTT TGGTTACTCC GTTAACGATT AAGGAAGGGG AAACACTACG TGATGCACTA
GAGCGTCATG AAGGTATGCA AGTTGAGCTC AGCTCGGCTA GCGAACTTTT CGTTACTCGT
AACTTTTCTT ACGATTATGA CTCTCGACGC AACAACATGA TGTTGTCTCA TGAAGCACCG
TTGTTTAAGC CGACTCAATT GCATGCAGCA GAGAGTGACG CTGCGGTTGC CCTTGCCAAA
GAGAATGCGG CCAACCGTAT TTACTTGGAA TCGGATAGCA AAGCGCCAAA TGGTCAAATC
CCATATTTCC CAACGTTTGC ACAAGACCTT GACCAAAATG GCTCTTCAGA GCAGCACATT
CGCCTAGGCT CTCGTGTCGA AGGCCTGCAA GGTGTGGTGA ATTACAGCTA CAACGAGTAC
CGCCTAATTG CGACCAATGA AGTCGATAGC AGCAACTTTG TCACGTCAGG TGATGACTTT
GACGTTGCGC GTAAAGCGGC GCCAGCCATA GCCGATTCTG ATTTACGAGT AGCGAGCTTC
AACGTTCTTA ACTACTTCAC TTCGGTTGCT GACAGCGGGC ACGACAACCC AACCGGGCAA
AATCGTGGCG CAACAAACCT TGATGAGTTC TTGATCCAGC AAGCGAAAAT CGTTTCAGCG
ATGAATAAGA TGGACGCGGA CATCATTGGC TTGATGGAAG TGGAAAACAA CGGCTTTGGT
GATGGTAGTG CTATCCAAAA CTTGGTTGAT GCTTTAAACG CTGAGATTGA TGACGTGGAA
GATCATTACA CGTATGTCGA AATCGAAGAG CAAGATAAAT ACCAAGAGGA ATACTTTGGC
AGTGATGCGA TCATGGTGGC GATCTTATAT CGTGCTAACG CAGTAACACC AAAAGAAGCA
GCAAAAGTCA TTGTGACGCC AGAGCAACAT ATTGCAGAGA ACACCATTAC TCGTAAAGAG
GGCACTGAAA GTAACCCTGC ATACGACAAA TATCAACGCC ATAGCTTATT ACAGACCTTT
ACAGTGAAAG AGACTGGCGA AGATCTTTCA GTGGTCGTGA ACCACTTTAA ATCGAAAGGT
TCTGAATGTA TTGAAGAGTG GATTGCTGGT GTAGAAGACT CAGAACCCGC GGATCTGCAA
GGTAACTGCA ACAACTTCCG TGTTTCTGCT GCGAAAGTCG TTGGTGAAGC GCTGAAAGAT
ATTGATGGCG ATGTGCTCGT TATGGGCGAT TTGAACGCTT ACGGCAAAGA AGATCCGTTA
CTGACCCTCA CTGATTACTC ACAAGAGAAA TACGGCCGTG ATATCTACAC TGCCGCTTAC
ACAACCATTG GTGGCGGTGA GCTTCAAGTA GAGAAAACCA AGATTGAAAA AGGCTACGGT
CTGCACAATT TAAACACCTT GCTGCATGGC GCTGATACGT TCTCGTACAC CTATTCAGGT
GAGTTGGGGA ACTTGGACCA TGCATTGGCA AGCAGCAGTT TAGCGCAAAA AGTGGTGGCG
ATTGAAGATT GGCACATCAA CTCACTAGAA AGTAACTTGT TTGAATACAG CAGCAAATAC
ACGGGTGACA TGCCGAAGTA CAAAGATGCG TTCTCAGCGT CTGATCATGA TCCAGTGATT
ATTGCTATTG ATTTGCCAGA TGATGATATC GATTTACCGA AAGCGGGTGA AAACTTAGCT
ATTGATGTAC GTCTACCACC AACTGCGGTT GCGGGCGATA TTGTGACAGT GAACTTAACA
GCATCTACGC AAGCGGCCGC GACAAGCAGT GATGCAAAAG TTTACTCGGC TAGCCAAACC
TTGACTCAAA CTGACATTGA CGCACGCAGC GTGAATATTG AGTTTGAACA AGCGCCAGAA
CAAGGTAATT ACCAGTTAGA AGAGAAAGTG ACAGACTCGA CAGGCAACGT CGTTAAGTTT
AGCTCTGTTC GTGATGTCTC AATGACGCAA ACTGAAACGG GTGCAGAAGG TTCGAAGGAC
TCAGATGGTG GTTCGTTTGG TTTTGGCGCG CTACTCGCGA TGCTTGGACT TGGCTTAGTA
CGTCGCCGCA ACTAA
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| Protein sequence | MDTLIKPSIL ALTIASALSA NANAEIIISQ YVEGGAYNKA VEIANTGDTA VTLTGYELAK
SSNGGGSWGS TLDLSDVTLQ AKQVYVLAHG DASEAIKAVA DYTDKNVANF NGDDPLALLK
DGEVHDILGV MGDVDFAKDT TLVRNSDALT PSTTYQSTQW TALPKDNIDG LGELNTTEPP
APFACEVDGQ EPAFTTIQEI QGEGASSPFI DGYPYITTED HFVTGVVSAV TTGLTKGFYL
QALENDGNDK TSEGLFIHTD VADTELKAGD VVCVKGKVQE YYSNTQLSSD ANSYVKTGTS
NASLVTPLTI KEGETLRDAL ERHEGMQVEL SSASELFVTR NFSYDYDSRR NNMMLSHEAP
LFKPTQLHAA ESDAAVALAK ENAANRIYLE SDSKAPNGQI PYFPTFAQDL DQNGSSEQHI
RLGSRVEGLQ GVVNYSYNEY RLIATNEVDS SNFVTSGDDF DVARKAAPAI ADSDLRVASF
NVLNYFTSVA DSGHDNPTGQ NRGATNLDEF LIQQAKIVSA MNKMDADIIG LMEVENNGFG
DGSAIQNLVD ALNAEIDDVE DHYTYVEIEE QDKYQEEYFG SDAIMVAILY RANAVTPKEA
AKVIVTPEQH IAENTITRKE GTESNPAYDK YQRHSLLQTF TVKETGEDLS VVVNHFKSKG
SECIEEWIAG VEDSEPADLQ GNCNNFRVSA AKVVGEALKD IDGDVLVMGD LNAYGKEDPL
LTLTDYSQEK YGRDIYTAAY TTIGGGELQV EKTKIEKGYG LHNLNTLLHG ADTFSYTYSG
ELGNLDHALA SSSLAQKVVA IEDWHINSLE SNLFEYSSKY TGDMPKYKDA FSASDHDPVI
IAIDLPDDDI DLPKAGENLA IDVRLPPTAV AGDIVTVNLT ASTQAAATSS DAKVYSASQT
LTQTDIDARS VNIEFEQAPE QGNYQLEEKV TDSTGNVVKF SSVRDVSMTQ TETGAEGSKD
SDGGSFGFGA LLAMLGLGLV RRRN
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