| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002228 |
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| Symbol | |
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| ID | 8555901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 676780 |
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| End bp | 678075 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646405265 |
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| Product | putative integrase |
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| Protein accession | YP_003284856 |
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| Protein GI | 262393002 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCAAG ATAATAAGTA TTTAAAGAAA CGTAATAACC GTGATGTATG GCTTTTCTCT
AAGCGTATCC CTAAACAGCT ACAGCACCTT TATGAAGGCA AAGAAGTCTT AACCAAATCT
TTGAAGACCT CCTGCATTAA GACAGCACGA TTGCGCAGAA ATGCTCTTCT TGCAGAAATG
AGCTTACTGG AAGAACAAGC CATTGACGGT GGACGAGCTA ATTTCATCAG CTTTTATCGA
ACCCTCAAAA CAGCTAAAGA AGTACACGGC TATGAGCCTT ACGGACAGCA CTATAATATT
GATTTAGAAG ACGTAACAAA CACTGACCTT TATCCAGAAA TACAACGTGA CGCCTTGAAG
GCTGTTTATT CTGGTGAAAC TCCCCTCAGA TATACCTGTA CACTAAGGGA GTCTATGACA
GAGTGGTTAG AGCTAAATAG AAACCGAAAT AAAGACACCA TATCCAAAGT TAAATCTACA
ACTGAACGCT TTCTCAAGCA CTGCGGCGTA TTTGACTTAC CACTACTCAG TATTGAAAGG
GCTGCCGTTG TTAACTTCAT TCACGACCTA GCAGACGAGT GCTCTGTATC TACAATAAGA
GCTCACTTAA GTCGACTAAA GACCGTCTAT AAACATGCTT GGGATATGGG CCGCATCAAA
AACAAAGACA ACCCCTTTGC AGAGCATTCA CTAGCTCATC TTGATAAACG AAAAGAAAAA
AAACCTAAGC AATTATTTAG CAGAGAACAA CTCCAAATAT TAGCTAAATG GGCTGACGAG
CAAACATCTA AAGGTTCAAA CATGGGGCTA CTCTTCCGTC TCGGACTCTT CACTGGAAGC
AGGATTGGAG AGCTATGTAA CGTTAAGGTT AAAGATGTCT ACACTGACTC AGGGATTACA
GCTATAAAAA TTAGAGTTGG TAAAACCTCA GCAGCACAAC GGACAGTGCC GTTAACAGAT
TCAATAGCAT CAGAAGTATT ACAGCTGATA AAAGGGAAAA CACCTGAAAC TAAGTTACTT
GGATTAAACG GAGATAAGGC TAGTCGTGAC TTCTCTCGTT TTAAGGTAGC TAATGTAAGC
AAAGACCCAT CCCAATGCTT TCATAGCCTT CGTGTTCACG TATCAACAGC AATGCTTAGG
GCTGGAATAC AGGAGCACCA TTCCGCTTTC ATTGTGGGTC ATGAGGGCGG TAAGACCATG
ACTTATGGCT ACTACGCTAA AGGAGATGAG TTAAAAACGC TCAAAGAATA CATAGATAAA
GCAGAGGAAG TAATTAAGAG AGACTGGCTA AATTAG
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| Protein sequence | MAQDNKYLKK RNNRDVWLFS KRIPKQLQHL YEGKEVLTKS LKTSCIKTAR LRRNALLAEM
SLLEEQAIDG GRANFISFYR TLKTAKEVHG YEPYGQHYNI DLEDVTNTDL YPEIQRDALK
AVYSGETPLR YTCTLRESMT EWLELNRNRN KDTISKVKST TERFLKHCGV FDLPLLSIER
AAVVNFIHDL ADECSVSTIR AHLSRLKTVY KHAWDMGRIK NKDNPFAEHS LAHLDKRKEK
KPKQLFSREQ LQILAKWADE QTSKGSNMGL LFRLGLFTGS RIGELCNVKV KDVYTDSGIT
AIKIRVGKTS AAQRTVPLTD SIASEVLQLI KGKTPETKLL GLNGDKASRD FSRFKVANVS
KDPSQCFHSL RVHVSTAMLR AGIQEHHSAF IVGHEGGKTM TYGYYAKGDE LKTLKEYIDK
AEEVIKRDWL N
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