| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001942 |
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| Symbol | |
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| ID | 8555571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 334588 |
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| End bp | 335931 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646404935 |
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| Product | putative sigma-54 interacting response regulator transcription regulator protein |
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| Protein accession | YP_003284570 |
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| Protein GI | 262392716 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTTGC CAAGCCTGTT TCTACGAATA CAAGACCCGA CACTTAAAGA TGCTATCGCC
TCTTGCCAGG AACTGAACAA ATTTCGTCTG CATAATACCG ATGCCGCAGA TGGTTGGATT
GAAGATTTCC TACAACTCAA ACCGGAAGTT GCGATTGTTG AAGTCGCCCA CTTTACTAGC
GCAGATTACC AGCGCCTTTC TAATATCGAA GACATCTACG ATATGGACTT GATCATCATT
AGCTCTGGTG CTCCAAACGA AAATTTGGAT AAGCTAATGA ACTTAGGTGC AATTTTTCAC
TACAGAAAAC CCGTCGATAT TGCCATTTTG ACGGACACCC TAAGCGAAGT CAGCCAGTAC
TATCAGCAAA AACAAGATCA AGGACGTAAA GTGTCCACTA GCGATCTCGA CCAGTTTGGC
CTTTTGGTGG GGTCCTCATC GCCAATGCAT CAGCTCTATC GCATGATCCG ACGCGTCGCA
AAAACAGAAG CCAACGTCCT CATTGTCGGT GAAAGCGGCT CAGGTAAAGA GTTAGTCGCA
CAGACCATTC ATTTAGCTAG CGATCGCAAG CAACAACCCT TTATCGCGAT TAACTGTGGT
GCGATTAGCC CAGAATTGGT CGATAGTGAA CTGTTTGGCC ATGAAAAAGG CGCCTTTACC
GGAGCGAATA AAACTCACCA AGGTGTATTT AAACAGGCAG AAGGCGGCAC GCTGTTTTTA
GATGAAATCA CCGAGATGCC TATCGAGCAT CAAGTGAAGC TATTGCGTGT GTTGGAAACC
GGAGAATATC GCCCAGTGGG TAGTAATACA GTGCATATCG CCAACACTCG CATCATTGCC
GCCACCAACC GTGATCCTAA AGTCGCCATT GAAGAGCAGT TCTTGCGTGA AGATCTGTTT
TTCCGTTTAT CGCACTTCCC ATTAACGATA CCGCCGCTGC GAGAGCGAGG CGGTGACATC
GTCGGTCTGG CTAAGCACTT TATCGCGCAC CGCAACGCAA ATGAGGCTAA AACCAAAACC
ATTCTTGATT CTGCCATCCA AAAAATCGCC GTGCACGATT GGCCAGGTAA TGTCCGTGAG
CTCAAACACA CGATCGAGCG CGCGTTTATT TTGGCTGACG ACACCATCCG AGATGAACAC
TTGATATTCG ATACGCCACC ATTGGAAACA GGCACCAGCA TCGAAGACCT TGTTCCAGCG
GGCGTTTCGC TAGAAGAGCT AGAAAAAGCC GCCATTCTCA ATACGCTTGA AGAGAATCAA
GGCAATAAAA CGGAATCTGC GCAAGAGTTA GGCATTAGCG TTAAAACGCT CTACAACAAA
CTCGAAAAGT ATCAAGACGA GTAA
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| Protein sequence | MSLPSLFLRI QDPTLKDAIA SCQELNKFRL HNTDAADGWI EDFLQLKPEV AIVEVAHFTS
ADYQRLSNIE DIYDMDLIII SSGAPNENLD KLMNLGAIFH YRKPVDIAIL TDTLSEVSQY
YQQKQDQGRK VSTSDLDQFG LLVGSSSPMH QLYRMIRRVA KTEANVLIVG ESGSGKELVA
QTIHLASDRK QQPFIAINCG AISPELVDSE LFGHEKGAFT GANKTHQGVF KQAEGGTLFL
DEITEMPIEH QVKLLRVLET GEYRPVGSNT VHIANTRIIA ATNRDPKVAI EEQFLREDLF
FRLSHFPLTI PPLRERGGDI VGLAKHFIAH RNANEAKTKT ILDSAIQKIA VHDWPGNVRE
LKHTIERAFI LADDTIRDEH LIFDTPPLET GTSIEDLVPA GVSLEELEKA AILNTLEENQ
GNKTESAQEL GISVKTLYNK LEKYQDE
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