Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001883 |
Symbol | |
ID | 8555512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 273273 |
End bp | 273764 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646404876 |
Product | general secretion pathway protein M |
Protein accession | YP_003284511 |
Protein GI | 262392657 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3149] Type II secretory pathway, component PulM |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACT TAATTTCTCA AGCTCAGGCT TGGTGGAGCA GCATCTCTCA GCGTGAGCAG CGTTTGGTCA TGGGGTGTGG CGCTATTGCC GTTATCGGCA TTATTTATTG GGGGTTGCTA CAGCCAATGA GCCAACGTGC GGAGCTAGCT CAATCACGTA TTCAAAGTGA AAAACAGTTG CTGGCTTGGG TACAAGATAA AGCGGATGGC ATTACTGCAC TGCGCAAAAG CAGCGGTGTG AGCTACTCTA GCCAACCGTT GAATCAACTG GTTTCTTCTT CAGCCCGTCG TTATAAAGTT GAGTTGATTC GAGTACAACC TCGCAATGAG AGTGTTCAGG TGTGGATCAA ACCACTCGCG TTTAATCAGC TGGTGGATTG GTTACGTTAC TTGAAAGAGC AACAGGGTAT TGAAGTCGAA TTTTTAGATA TCGACCGAAC GGATCAAGCG GGCATGATTG ATGTGAACCG CCTTCAGTTT AAGCGAGGTT AA
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Protein sequence | MKNLISQAQA WWSSISQREQ RLVMGCGAIA VIGIIYWGLL QPMSQRAELA QSRIQSEKQL LAWVQDKADG ITALRKSSGV SYSSQPLNQL VSSSARRYKV ELIRVQPRNE SVQVWIKPLA FNQLVDWLRY LKEQQGIEVE FLDIDRTDQA GMIDVNRLQF KRG
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