Gene VEA_001883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001883 
Symbol 
ID8555512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp273273 
End bp273764 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content47% 
IMG OID646404876 
Productgeneral secretion pathway protein M 
Protein accessionYP_003284511 
Protein GI262392657 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3149] Type II secretory pathway, component PulM 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACT TAATTTCTCA AGCTCAGGCT TGGTGGAGCA GCATCTCTCA GCGTGAGCAG 
CGTTTGGTCA TGGGGTGTGG CGCTATTGCC GTTATCGGCA TTATTTATTG GGGGTTGCTA
CAGCCAATGA GCCAACGTGC GGAGCTAGCT CAATCACGTA TTCAAAGTGA AAAACAGTTG
CTGGCTTGGG TACAAGATAA AGCGGATGGC ATTACTGCAC TGCGCAAAAG CAGCGGTGTG
AGCTACTCTA GCCAACCGTT GAATCAACTG GTTTCTTCTT CAGCCCGTCG TTATAAAGTT
GAGTTGATTC GAGTACAACC TCGCAATGAG AGTGTTCAGG TGTGGATCAA ACCACTCGCG
TTTAATCAGC TGGTGGATTG GTTACGTTAC TTGAAAGAGC AACAGGGTAT TGAAGTCGAA
TTTTTAGATA TCGACCGAAC GGATCAAGCG GGCATGATTG ATGTGAACCG CCTTCAGTTT
AAGCGAGGTT AA
 
Protein sequence
MKNLISQAQA WWSSISQREQ RLVMGCGAIA VIGIIYWGLL QPMSQRAELA QSRIQSEKQL 
LAWVQDKADG ITALRKSSGV SYSSQPLNQL VSSSARRYKV ELIRVQPRNE SVQVWIKPLA
FNQLVDWLRY LKEQQGIEVE FLDIDRTDQA GMIDVNRLQF KRG