Gene VEA_001873 details

Gene Information

• Locus tag: VEA_001873
• ID: 8555502
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: -
• Start bp: 263206
• End bp: 265086
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 646404866
• Product: hypothetical protein
• Protein accession: YP_003284501
• Protein GI: 262392647
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4067] Uncharacterized protein conserved in archaea

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAAAA AAATGTCTTT GGCGTTAGCG CTTACGAGTG CCTTACTTGT CGCCCCGCTT 
AGTTGGGCGC AATCCATATC AGCAACCACA CAAGACCCTG TATATCAGCT TGATGACAAG 
TTGGTGCTTG GACGAGTGGA GAGCGTTTAC TACAGTGATA TTCCAGAGCT AAAAGCGGTA 
CCATTTATTG GCAAGATTGA TACTGGTGCT GACACCACGT CTATGCATGC AGAGAACATC 
CATGTCAGTA GCTCTCATCC TGACTACCAG AACTTGAAAG ACAACGAGTT GTTGTGGGCG 
ATTGTCGATG ATTTAGGTGG GACGAAGGCG AAGTGGGATG CCGATACTTT TAAACCATAT 
CAAGTGAAGG TGAGCTTTAC GGTTCCTCAT CCTTACACAG GAAAAGAAAT ACAGATTACC 
GATGATCTGG AGCGAGTGAG CGCTATTCGT AGTCGAACAA GCAAAAAGCC TATTTTACGC 
CCGACGATAA AAATGCCGAT GACGATTGCA GGCCACACCG TTGATACAGA AGTGAACCTG 
ACCAAGCGCA CGCAATTCTC TTCTCCTATC TTGATTGGTA AAACCTATCT CGATAACAAT 
GCGTGGGTAT TCGCTGGCTA CGACTATCTT CAAGAGCAAC CAAGCGCAAA AATGATCGGA 
AAAAAAGAGA CGGTTGAAGT CGAAGGCGTG CCATACAAGA TCAGCATCTC AACCACCAGC 
CGCTACACCA ACGTTCACGC ACTGGATATC AAGGTTGATA AAAAGAACAA TGAAGTTTCT 
TTCACGCTAG AAGGTGAAAA CGGCAAGCGC CACCCAATGA CGTTACCTTT GGTACGCATG 
CTGAAAACCA CCAAGAGCGA GCGTCCGTTG GTCTACTTAC CAGTGAAAAT CGACGAAAAC 
GAAACTCAAC GTTGGTTAGT CTATTTGCGT GACCGCAGTA AGTTCAGTTC ACAAATTCGC 
TTGGGTCAGG ATGTCGCGAG CCAACACTTT GTGATTGATA CCGACAGAGA AAACCTATTG 
GGCGGTGTTG AAAAAACGTT CAAGAGCGCA CTCAAGTCAA AGCCCCTCGT GATTTCACCG 
GAAGAACAAG TCACCATTGA TGGTTATACC GTTCTTGCTT ACCCCACGTT TACGGTGAAA 
ACGCCATTAT TGCGTGTAAA TGGCTTTGAA GTAACAGAAA AAGGTAAGGA TGAATCCGTC 
ACGTTTTATT TAATGAACGA TGAGGGTAAA GAAGAAAAAA TTACCAAGCC TGTGGTGAAA 
AAACTCAAAG TGGGTAGCAC TGTGCGTCCC GTTGTTGATG GCGATTTCCT TTTCGGTAGC 
AAAGAGACAT CAATGGAATT TGCACTCGAT GTGCTAGATG AAGACGAGAC GCAACCATTT 
TTCGTTTTTG GTCATGACAT CGCCAAAGGC GGTGTGCTGC TGAATACTCG CGCCGACCAT 
TTACTAGAGG CAAGACCGCT TTTCAAAGCC GGTCATATCG AAGTGGCTGA AGTGGAAGGG 
ATGTCTTTCC CTGTTAAATT GGACACTGGT GCTGACGTGA GCTCGATTAA TGCCAAGGAC 
ATCAAGCGCT TTCAAAAAGA CGGTAAAGAT ATGGTGAGCT TTACTTATGA AAACGATCTA 
GGCATGACCA AGGCGTTTAC CCGTGAGGTG GTGGATGTCA TGCGTATAAC GGCCAAAAAA 
GGAGAAAAGG CCAACGAACG GCCGGTAGTA GAAATGCACG TTAAACTTGG CGAGTTAGAG 
AAGAAGATCC GAGTCAATTT GCAAGACCGA GGTCGCTTCC ATTACAGCAT GATTTTAGGT 
AAAAACTTCC TAAAACATGG CGCGGTTGTT TCGAGTGATA CGAATTACAT CGTGACGCAA 
AAACCAGATT ACGAAAAGTA G 

 

Protein sequence

MMKKMSLALA LTSALLVAPL SWAQSISATT QDPVYQLDDK LVLGRVESVY YSDIPELKAV 
PFIGKIDTGA DTTSMHAENI HVSSSHPDYQ NLKDNELLWA IVDDLGGTKA KWDADTFKPY 
QVKVSFTVPH PYTGKEIQIT DDLERVSAIR SRTSKKPILR PTIKMPMTIA GHTVDTEVNL 
TKRTQFSSPI LIGKTYLDNN AWVFAGYDYL QEQPSAKMIG KKETVEVEGV PYKISISTTS 
RYTNVHALDI KVDKKNNEVS FTLEGENGKR HPMTLPLVRM LKTTKSERPL VYLPVKIDEN 
ETQRWLVYLR DRSKFSSQIR LGQDVASQHF VIDTDRENLL GGVEKTFKSA LKSKPLVISP 
EEQVTIDGYT VLAYPTFTVK TPLLRVNGFE VTEKGKDESV TFYLMNDEGK EEKITKPVVK 
KLKVGSTVRP VVDGDFLFGS KETSMEFALD VLDEDETQPF FVFGHDIAKG GVLLNTRADH 
LLEARPLFKA GHIEVAEVEG MSFPVKLDTG ADVSSINAKD IKRFQKDGKD MVSFTYENDL 
GMTKAFTREV VDVMRITAKK GEKANERPVV EMHVKLGELE KKIRVNLQDR GRFHYSMILG 
KNFLKHGAVV SSDTNYIVTQ KPDYEK