Gene VEA_001859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001859 
Symbol 
ID8555488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp249342 
End bp249692 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content48% 
IMG OID646404852 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_003284487 
Protein GI262392633 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGACA TCGTATTTAT CATGTTGATC TTCTTTATCG TAACAACATC GTTCGTAAAA 
GAAGCAGGTC TGGAAGTAAA CCGTCCGACG GCAAGCTCAG CGCAAACCGT TAAGAAAGGT
AACATCATGG TCGCAGTTGG TGCGGCGGGT GATGTTTGGG TTGATAAACG CCGCATCGAA
GTGGACGCGG TTCGCGCGAA TATTGAACGT CTTCGTGCAG AAAGTCCTGA TGGCGCAGTT
GTTATCCAAG CCGACACTGA AGCAAATGCT GGCGTAGTCG TGAAGGTTAT GGACCAGATC
AAAATGGCAG GTGTAGAAAG CATCTCCATT GCCGCAACCA ATAAGGATTA A
 
Protein sequence
MLDIVFIMLI FFIVTTSFVK EAGLEVNRPT ASSAQTVKKG NIMVAVGAAG DVWVDKRRIE 
VDAVRANIER LRAESPDGAV VIQADTEANA GVVVKVMDQI KMAGVESISI AATNKD