| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001787 |
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| Symbol | |
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| ID | 8555416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 176569 |
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| End bp | 178308 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646404780 |
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| Product | capsular polysaccharide export system periplasmic protein KpsD |
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| Protein accession | YP_003284415 |
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| Protein GI | 262392561 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATA AAGCAGCTCA ATGGCTAGTT GCAATTACAA GCTTTGCTTG TATCAATTCA
GCTTTCGCAC TTGATAGTAA CAATTTAAAC CTCAATGCAA CTAATCCTAC ATTTCCCTCT
TCTGGAACTT TAAACCAATC TCAAACGCCA CCCAACGAGA CACTCTCTGC TGGTTCATTT
AATAAAGAGA ACAGAAATAA CCTTCTTTTG CCAGGTGAAG TGGATGTTAG ACAATTACTC
CCTTCCTCTG GAGAAGAACT ACCACCTCCT TATGCAGCAA ATATTTTTGC GGGTGGTTAT
GAGACTGAAA GAGCTGATGG TTTGAATGAT AATTATCTCG TTGCGGCTGG AGATAAGATT
AACATCTGGC TGTGGGGAGC TGTAAATTAC TCTAATGTTG CTACGGTGGA CAATCAAGGA
AATATCTTTA TACCAGAAGT TGGCCCGATT CATGTCCTTG GAACAAAAGC TAGCCAAATC
AACGAGCTTG TGACAAAAAA AATTAAACAC GTTTATACCA CTAACGTAAA CGTGTATGTG
AATTTACTTA CTGCTACGCC AGTTAGTGTT TTTCTAAGTG GGCCGGTCAT TAGACCAGGG
CAATACGCTG GAATGGCCTC TGATTCAATA CTTTATTTTC TTAAACGTGC TGGCGGTATT
GACTCTGAAC GTGGCAGTTA TCGAGAAATT CAAGTTCTAC GAAATGGTAA AATCATAACC
AATGTTGATC TCTATGATTT TATGCAATCT GGAGTTATGC CAAAAGTTAG TTTTAAAGAT
GGTGATGTTA TCTTGGTAAC ACCACAGAAA GCAGCTATCA CAGTATCCGG AGGGGCTCGC
AATCCCTTTC GCTTTGAACT GGAAAATTCT AGTGAATTAG GAGAAAAGTT AGCGGTTTAT
GCAAAACCGC TCGCAAAAGT TTCGCATGTT GGAGTTGTTG GGAATCGAAT AGATGGGCCA
TTCTCACGTT ATATGACTTA CCAAGATTTC CTGAGGTTTG AATTACGAGA CGGGGATAAA
GTTATCTTCA ATGATGACTT ACACGCTCAA GTCATAGATG TTCAGGTTTC TGGTAGCTAC
TTAGGACCAT CTTACTTTGC AGTTACAAAA GGCACTAAGT TACATGATTT GCTGAATAAT
ATTCCTATTG ATCCCATGCT TGCAGATTAC CAATCTATTT ATATATTGAG AGATAGCGTT
GCGAAAAAGC AAAAAGAAAT GATTGATGAG TCTCTTAATC GGCTAGAAAG AAGTATTTTT
ACTGCACCAG CGTCTTCAGA TGGAGAGGCT GTAATCAGAG CAAAAGAAGC AGAAATGGTA
CTTCAGTTTA CTGAACGAGC TCGTAAAGTT CAGCCGCTAG GGAAAGTCAT TGTTTCTGAA
CATGGTCTTG TAGCTAATAT ATTATTAGAA CAAGGTGACC AAATTGTTAT TCCAAACAAA
ACAGATCTAA TTCAAGTGGG GGGTGAGGTT TTGATGCCAC AAGCGCTTGT TTATAACCCT
AATGCCACTA TCGACGACTA CATTGCGTGG GCCGGTGGTT TCACTGATAG GGCCGAGGAT
CAGCGTATAG CAGTTGTGCG AGCAAACGGC CTGGTTGAAT TTGATAGTGG GAAACCCATA
CAAAAAGGTG ATCAAATCTT AGTTTTACCT AAAGTTGACA CTAAAACAAT GCAGGCAGTT
AAAGATATTA CGCAAATCAT TTACCAAATT GCTGTAGCAG CAAATGTAGC GATAAACTAA
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| Protein sequence | MTNKAAQWLV AITSFACINS AFALDSNNLN LNATNPTFPS SGTLNQSQTP PNETLSAGSF
NKENRNNLLL PGEVDVRQLL PSSGEELPPP YAANIFAGGY ETERADGLND NYLVAAGDKI
NIWLWGAVNY SNVATVDNQG NIFIPEVGPI HVLGTKASQI NELVTKKIKH VYTTNVNVYV
NLLTATPVSV FLSGPVIRPG QYAGMASDSI LYFLKRAGGI DSERGSYREI QVLRNGKIIT
NVDLYDFMQS GVMPKVSFKD GDVILVTPQK AAITVSGGAR NPFRFELENS SELGEKLAVY
AKPLAKVSHV GVVGNRIDGP FSRYMTYQDF LRFELRDGDK VIFNDDLHAQ VIDVQVSGSY
LGPSYFAVTK GTKLHDLLNN IPIDPMLADY QSIYILRDSV AKKQKEMIDE SLNRLERSIF
TAPASSDGEA VIRAKEAEMV LQFTERARKV QPLGKVIVSE HGLVANILLE QGDQIVIPNK
TDLIQVGGEV LMPQALVYNP NATIDDYIAW AGGFTDRAED QRIAVVRANG LVEFDSGKPI
QKGDQILVLP KVDTKTMQAV KDITQIIYQI AVAANVAIN
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