Gene VEA_001786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001786 
Symbol 
ID8555415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp175303 
End bp176565 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content37% 
IMG OID646404779 
Productphosphoribosylamine-glycine ligase 
Protein accessionYP_003284414 
Protein GI262392560 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3562] Capsule polysaccharide export protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTG ATCATATAGT GTTATCGCTA GATCCAATGT ACTCGCCACT ACACGAAAAA 
ATAGCGGGGA TATTGGGAAA GAAAAGGTAT GCAGTTACTT CCTGTTTATC AAAAAAAATC
TATCTACCTA CTTTCAAGCA GTTTCTCGCA GTTAATATGA TCGCAGCAGT GAGTAAGGAT
CAAGCGCAGC CTTACCAAGA AAAAATATCT TTACTTCGAA CATACCATCA TGCTTATGCT
CAAAAAGTAG AAGGTCGGAC TCTCAGTAAT GAGGAGTTGA ACTATATGGC TAGGTTTTAC
GTGGCGCTTA AAGGTTTTGT TATAGAAAAA GATATCAATC TCGTTCTACT GCATAATGAT
GCAAGGTGGT ATCACGCTGT GGCAATTGAT ATATGCAAGG AGTTGGGTAT AAATTATTTG
GTTACAGAGC AGGGGCTTAT TCGACCATTT ACAACTGTTA TCGATCCCCA AGGTGTTAAT
GCCAACAGCA AGATAGATTT TAAAATATTT AGTAATGAGG TTCAGCACAC CCCAAAAGAG
CAGGGGAGTT TTATACCAAA AGATACTCAT GACTCAATAA AATCGATGTT TTTTTTCTTT
ATTTTTTTAT TTGGTTTCAC TTTTGAGCGG ATAAACAAAA ATCGAACAGT TATCCGCTAT
ATGCATAATA GCTATAGTTT GAAAAAGTAT TTCAAACGTA TTGCGAATAA ATTGCTTAAG
AAAAAAAAAA GGATATCAGT ACCATCATTG GGTTCCCAAG GTTCCATTTT GCTTTTACTC
CAGCTAGAAA ATGATTCTCA GTTTCTACTG CACAGCCCTT TTAAATCTAA TCAAGAAGTT
ATCAATTTGG TTGCGGACTT GGCAAAGACG GCAAAAATGA GCTTAGCAGT TAAGCTTCAT
CCGCTAGACG ATAAAGAGTA CCAACTTGAT GACAATACCT ACTATGTTGA AGGGAAAATA
GCAGACCTGG CGCGTGCCGC TGAAGCTGTA TTTACTATTA ATTCTAGTGC AAGTATTGAG
GTACTAAAGA CCGTGACTCC ATTAATATTG ATGGGCGAGT CAATTTATGC TTACAAAGGG
GTGGCAGTGG AGTTCGATTT TAACTATCCA TCTCAAACGA TAGTACAAGC AAAAAACGAG
GTCGACCCTG TTATCAGACA AAAATTCCTC TATTATCTGA GTAATGAATA CTTGGTAAAG
GGAGCTGGGT ATTCTTTTTG TTCTAAGTAC CTTAAGCACA AATTAGAACA AATTTTAATT
TAA
 
Protein sequence
MKTDHIVLSL DPMYSPLHEK IAGILGKKRY AVTSCLSKKI YLPTFKQFLA VNMIAAVSKD 
QAQPYQEKIS LLRTYHHAYA QKVEGRTLSN EELNYMARFY VALKGFVIEK DINLVLLHND
ARWYHAVAID ICKELGINYL VTEQGLIRPF TTVIDPQGVN ANSKIDFKIF SNEVQHTPKE
QGSFIPKDTH DSIKSMFFFF IFLFGFTFER INKNRTVIRY MHNSYSLKKY FKRIANKLLK
KKKRISVPSL GSQGSILLLL QLENDSQFLL HSPFKSNQEV INLVADLAKT AKMSLAVKLH
PLDDKEYQLD DNTYYVEGKI ADLARAAEAV FTINSSASIE VLKTVTPLIL MGESIYAYKG
VAVEFDFNYP SQTIVQAKNE VDPVIRQKFL YYLSNEYLVK GAGYSFCSKY LKHKLEQILI