Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001771 |
Symbol | |
ID | 8555400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 156565 |
End bp | 157872 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 646404764 |
Product | O-antigen flippase Wzx |
Protein accession | YP_003284399 |
Protein GI | 262392545 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAG ACATATTTCA CAGATTATTG AATCATAAAA TGATAAGGAA TGTTCTTATT CTTATGTCAG GAAGTGCGGG GTCTCAGGTA ATAGGTATTT TATTTATACC TATTATCACA AGATTCTATG GTCCAGAGGC TTATGGAATA TTAGGTGTTT TTATTGCTTG TCTTGGAGTT TTAATTCCAT TATCTACCTT TGGTTTTCCT GGTGCAATTG TGCTTCCCAA AGACGAAAGA AAAGCAATTA ATTTGGCTAG ATTATCAATA TTAACCTCGT TGATTGTGTT CCTTTTTTCT TTTGTTATTA TTTTTTGTTT TGGTGAGTAT GTTTTTAATC AAATCAGTGA TGGTAAGTTG ATTGATTTTA TGTACTTAAT TCCTATAGGA ATGCTAATGG GAGGGTGGCT TGACGTTTCA CACCAGTTAT TAATACGAAA AGGCGATTTT AAAACAATAG CTTCTATTTC CATATTACAC TCCTTTTTGA ATTATGGTGG ACAAGCCCTA TTGGGTTTTT TAAATCCAAT AACTAAGTTT CTATTGGTAA TCCATGTTGC TAGCTCAGCT ATCAGAGTTA TTACTTTAAA TAAATTAGGA ATGTTTGGCT TCTTTAGTTT TGGATTTATT AAGTTGCCAA ATGATTTTAA GGAAATTATA TATGAATATA GGGAGTTTCC TTGTTATCGA GCACCTCAGA TGATTATAAA TGCTCTTTCT CAAAGTGTGC CTGTTATTCT ATTTGCTTCT TTGTTTTCTC CTGTTTCAGC TGGCTATTAT GCATTGACTA GAACCATATT AAACGTACCC ATTAGGCTTT TAGGTAACTC TCTTCAGAAT GTTTTTTATC CTAATTTTAA TGATTTGGTC GTTAACTTGA AATGTTGCTC CAACCTCTTG TTAAAAACGA TGTTTATATT GTTTTTACTA GGTTTAGTCC CATCCCTGAT AATTTTTATT TATGGTCCTG ATATTTTTTC TATTGCTTTC GGTGAAAAAT GGAGAACATC AGGTTCTTAT GCGCAATGGC TTACTTTATG GCTATATTTG GTTTTGATTA CTCGACCAGT TGTAGCTGCT ATTCCAGTAT TGGGACTTCA AAGATGGTAT TTGGTTTTTG AGGTTGTTAG TATTATTGTT AGATGTTTGG TTTTTATTTT TTCAGCATCG TTTGAATTAG ATGAATTGTC AGTGGTGGCT ATATTTAGCT TGTCTGAAGT TATTTTGCAT ATAATTCTGG CTGTAAAGGT TTATATGTCT TCAGTTAGTC ATGATGTGAA AATTAATCAA ATGAAACTTA TTGGATAA
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Protein sequence | MTKDIFHRLL NHKMIRNVLI LMSGSAGSQV IGILFIPIIT RFYGPEAYGI LGVFIACLGV LIPLSTFGFP GAIVLPKDER KAINLARLSI LTSLIVFLFS FVIIFCFGEY VFNQISDGKL IDFMYLIPIG MLMGGWLDVS HQLLIRKGDF KTIASISILH SFLNYGGQAL LGFLNPITKF LLVIHVASSA IRVITLNKLG MFGFFSFGFI KLPNDFKEII YEYREFPCYR APQMIINALS QSVPVILFAS LFSPVSAGYY ALTRTILNVP IRLLGNSLQN VFYPNFNDLV VNLKCCSNLL LKTMFILFLL GLVPSLIIFI YGPDIFSIAF GEKWRTSGSY AQWLTLWLYL VLITRPVVAA IPVLGLQRWY LVFEVVSIIV RCLVFIFSAS FELDELSVVA IFSLSEVILH IILAVKVYMS SVSHDVKINQ MKLIG
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