Gene VEA_001771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001771 
Symbol 
ID8555400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp156565 
End bp157872 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content32% 
IMG OID646404764 
ProductO-antigen flippase Wzx 
Protein accessionYP_003284399 
Protein GI262392545 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAG ACATATTTCA CAGATTATTG AATCATAAAA TGATAAGGAA TGTTCTTATT 
CTTATGTCAG GAAGTGCGGG GTCTCAGGTA ATAGGTATTT TATTTATACC TATTATCACA
AGATTCTATG GTCCAGAGGC TTATGGAATA TTAGGTGTTT TTATTGCTTG TCTTGGAGTT
TTAATTCCAT TATCTACCTT TGGTTTTCCT GGTGCAATTG TGCTTCCCAA AGACGAAAGA
AAAGCAATTA ATTTGGCTAG ATTATCAATA TTAACCTCGT TGATTGTGTT CCTTTTTTCT
TTTGTTATTA TTTTTTGTTT TGGTGAGTAT GTTTTTAATC AAATCAGTGA TGGTAAGTTG
ATTGATTTTA TGTACTTAAT TCCTATAGGA ATGCTAATGG GAGGGTGGCT TGACGTTTCA
CACCAGTTAT TAATACGAAA AGGCGATTTT AAAACAATAG CTTCTATTTC CATATTACAC
TCCTTTTTGA ATTATGGTGG ACAAGCCCTA TTGGGTTTTT TAAATCCAAT AACTAAGTTT
CTATTGGTAA TCCATGTTGC TAGCTCAGCT ATCAGAGTTA TTACTTTAAA TAAATTAGGA
ATGTTTGGCT TCTTTAGTTT TGGATTTATT AAGTTGCCAA ATGATTTTAA GGAAATTATA
TATGAATATA GGGAGTTTCC TTGTTATCGA GCACCTCAGA TGATTATAAA TGCTCTTTCT
CAAAGTGTGC CTGTTATTCT ATTTGCTTCT TTGTTTTCTC CTGTTTCAGC TGGCTATTAT
GCATTGACTA GAACCATATT AAACGTACCC ATTAGGCTTT TAGGTAACTC TCTTCAGAAT
GTTTTTTATC CTAATTTTAA TGATTTGGTC GTTAACTTGA AATGTTGCTC CAACCTCTTG
TTAAAAACGA TGTTTATATT GTTTTTACTA GGTTTAGTCC CATCCCTGAT AATTTTTATT
TATGGTCCTG ATATTTTTTC TATTGCTTTC GGTGAAAAAT GGAGAACATC AGGTTCTTAT
GCGCAATGGC TTACTTTATG GCTATATTTG GTTTTGATTA CTCGACCAGT TGTAGCTGCT
ATTCCAGTAT TGGGACTTCA AAGATGGTAT TTGGTTTTTG AGGTTGTTAG TATTATTGTT
AGATGTTTGG TTTTTATTTT TTCAGCATCG TTTGAATTAG ATGAATTGTC AGTGGTGGCT
ATATTTAGCT TGTCTGAAGT TATTTTGCAT ATAATTCTGG CTGTAAAGGT TTATATGTCT
TCAGTTAGTC ATGATGTGAA AATTAATCAA ATGAAACTTA TTGGATAA
 
Protein sequence
MTKDIFHRLL NHKMIRNVLI LMSGSAGSQV IGILFIPIIT RFYGPEAYGI LGVFIACLGV 
LIPLSTFGFP GAIVLPKDER KAINLARLSI LTSLIVFLFS FVIIFCFGEY VFNQISDGKL
IDFMYLIPIG MLMGGWLDVS HQLLIRKGDF KTIASISILH SFLNYGGQAL LGFLNPITKF
LLVIHVASSA IRVITLNKLG MFGFFSFGFI KLPNDFKEII YEYREFPCYR APQMIINALS
QSVPVILFAS LFSPVSAGYY ALTRTILNVP IRLLGNSLQN VFYPNFNDLV VNLKCCSNLL
LKTMFILFLL GLVPSLIIFI YGPDIFSIAF GEKWRTSGSY AQWLTLWLYL VLITRPVVAA
IPVLGLQRWY LVFEVVSIIV RCLVFIFSAS FELDELSVVA IFSLSEVILH IILAVKVYMS
SVSHDVKINQ MKLIG