| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001695 |
|---|
| Symbol | |
|---|
| ID | 8555324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 95976 |
|---|
| End bp | 96614 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646404688 |
|---|
| Product | peptide methionine sulfoxide reductase MsrA |
|---|
| Protein accession | YP_003284323 |
|---|
| Protein GI | 262392469 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0225] Peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAACA AACAAACATT GATCAGTATA GAAGATGCCT TGCCAGGTAG AGATCAACCG
ATGCAGGTTG AAGATCATCA TTTTGTAAAT AAATCTAACT TAAAGGCACC ATTGGAGCCG
CATCAACAAC AAATTCTGCT GGGAATGGGC TGCTTTTGGG GTGCTGAGCG CGTATTTTGG
CAACTGGATG GGGTTATCTC CACTTCGGTT GGCTACGCCG GTGGATATAC ACCCAATCCT
ACTTATGAAG AGGTGTGTAC GGGTAAAACA GGCCATACAG AGGTAGTACG AGTCGTCTTC
GATGAACGCG TGATTTCCTT AGAAAAACTA CTGGCCGTTT TTTGGGAGAA ACATGACCCA
ACCCAGGGGA TGCGTCAAGG TAACGATTTG GGCACACAAT ACCGTTCGGC TATTTACACT
TATTCCGCGA AGCAGCAAGA GAGCGCAGAA AAATCGAAGC TCTTGTATCA ACAAGCACTG
CAAGAGGAAC TACGCGCGAA CATCACCACT GAGATACAGC CAGCGGGCCC GTATTATTTT
GCCGAAACTT ACCACCAGCA ATATCTGGCT AAAAACCCTG ACGGTTACTG CGGTATCGGT
GGCACAGGTG TTTGCTTTCC ACCCAGCTTA CAAAGTTAG
|
|---|
| Protein sequence | MLNKQTLISI EDALPGRDQP MQVEDHHFVN KSNLKAPLEP HQQQILLGMG CFWGAERVFW
QLDGVISTSV GYAGGYTPNP TYEEVCTGKT GHTEVVRVVF DERVISLEKL LAVFWEKHDP
TQGMRQGNDL GTQYRSAIYT YSAKQQESAE KSKLLYQQAL QEELRANITT EIQPAGPYYF
AETYHQQYLA KNPDGYCGIG GTGVCFPPSL QS
|
|---|
| |