| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_4616 |
|---|
| Symbol | |
|---|
| ID | 8553998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | - |
|---|
| Start bp | 4948320 |
|---|
| End bp | 4949318 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_003275637 |
|---|
| Protein GI | 262204429 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCG GTGTCTACAC CGCCATCCTG CACGACCGCT CACTGCCCGA GGCGCTCGAG
GTGATCGGTT CCCTCGGCCT GACCGGGGCC GAGATCAACG CCGGCGGGTT CCTCGGTACC
CCGCACCTGC CGGTGGCCGA ACTCCTCTCC GGCGACGTCT CGGCCAAGGA CTACCTGGCC
ACCTTCGAGG GCACCGGCGT CGAGATCGCG GGCCTCAACT GCAACGGCAA CCCCCTGCAC
CCGGACGCCG AAGTGGGGCC GGAGGACGCC GACGACCTGC GCAACGCGAT CCGCGTCGCC
GGATTGCTCG GTGTCGATCG TGTGGTCACG ATGTCCGGTC TGCCGCAGGC GCATCCGGGT
GGCCAGTGGC CGGCTTGGCA CGTGAACACC TGGGACTCAG GCTATCTCGA CTCCCTTGAC
TACCAGTGGG ACGAGGTCGC GGTTCCGTTC TGGACCGAGA TCGACGCGCT GGCAAAGGAG
AACGGAGTCA AGGTCGCCAT CGAGATGCAC CCGCAGAACC TGGTCTTCAA TCCGCCGACG
ATGAAGCGTC TCGTGGAGAA GACCGGTGCC ACCAATGTGG GTGCCGAGAT GGATCCGTCG
CACCTGTTCT GGCAGGGCAT CGACCCGGTG GCGGCCGTCG AGTGGCTCGG CCCGCTGGTC
TTCCATGCCG CCGCCAAGGA CACCCGGATC AACGAGAACT GCAAGATCTA CGGTGTGCTC
GACGATCGAT TCACTCGTAT CCCGTTGTCG GAGAACCCGA CAAGCCTCGG GGGCAAGCAC
GTCGTGAACA AGTGGCCGGA GGATTCGGCA TGGGACTTCG TGGCCGTCGG CCGCGGTCAC
GACGTCGATT TCTGGGCCCG CTTCCTGCGC GCGTTGGAGC AGGTCGATCC GAACATGGCC
GTCAACATCG AGCACGAGGA CGTCGAACTC GGACAGATCG AGGGTCTGCA GAAGGCCGCC
GAGACCCTCA AGGCCGCAAA CTCGGCACTG GTCGGTTGA
|
|---|
| Protein sequence | MKLGVYTAIL HDRSLPEALE VIGSLGLTGA EINAGGFLGT PHLPVAELLS GDVSAKDYLA
TFEGTGVEIA GLNCNGNPLH PDAEVGPEDA DDLRNAIRVA GLLGVDRVVT MSGLPQAHPG
GQWPAWHVNT WDSGYLDSLD YQWDEVAVPF WTEIDALAKE NGVKVAIEMH PQNLVFNPPT
MKRLVEKTGA TNVGAEMDPS HLFWQGIDPV AAVEWLGPLV FHAAAKDTRI NENCKIYGVL
DDRFTRIPLS ENPTSLGGKH VVNKWPEDSA WDFVAVGRGH DVDFWARFLR ALEQVDPNMA
VNIEHEDVEL GQIEGLQKAA ETLKAANSAL VG
|
|---|
| |