Gene Gbro_4419 details

Gene Information

• Locus tag: Gbro_4419
• ID: 8553801
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gordonia bronchialis DSM 43247
• Kingdom: Bacteria
• Replicon accession: NC_013441
• Strand: +
• Start bp: 4727908
• End bp: 4728681
• Gene Length: 774 bp
• Protein Length: 257 aa
• Translation table: 11
• GC content: 67%
• Product: Xylose isomerase domain protein TIM barrel
• Protein accession: YP_003275452
• Protein GI: 262204244

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.446993
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCATCG GAGCCCACCT TCGTGAAGAC GGCGACCCAC TCGCCACGGC GGAAGAACTC 
GGCATCGACG TCTTCCAGAT GTTCGTCACC GACCCGCAGA GCTGGAAGAA ACCCGCACCC 
AACCCGCACG CCGCCGAGAT CCGCGACTCC GGCGTCGACG TGGTGGTGCA CTCGAGCTAC 
CAGATCAACG TCGCGAGCCT CAACAACCGG CTGCGTATGC CGTCGCGCAA AGCCGTCGAG 
CAACAGGCTG CCGCGGCCGC CGAACTCGGC GCCTTCGGCC TCGTCGTACA CGGTGGGCAT 
CTGCGCGACG GTGAGGATTC CGCGGAGGGT TTTGCCAACT GGCGCAAACT CTTCGACCGC 
CAGGTAGACA AGGGCGGCTT CGGCGTCCCG ATCCTCATCG AGAACACCGC CGGTGGTGAT 
CACGCGATGG CGCGCACCCT GGAGTCGATC GATCGGCTGT GGGAGGCCGT CGGCGACTTC 
GAGCAGGCGG GTTTCTGCCT CGACACCTGT CACGCGTGGG CGGGCGGTGA AGATCTGGTG 
GGACTGGTCG AGCGGATCAA GGCGATCACC GGACGCATCG ACCTCGTACA CCTGAACAAC 
TCACGCGACG AGTTCGACTC GGGCCGCGAC CGGCACGCGA ATCTCGAATC CGGGCACATC 
GATCCGGCTG TCCTGGCCGC GGTCGCCGCA GCCGCTGACG CACCGGTCAT TCTCGAGACC 
CCGGCCGACG GCATCCCCGG CGACCTCGCC TATCTGCGCG AAGCACTGGG CTGA 

 

Protein sequence

MRIGAHLRED GDPLATAEEL GIDVFQMFVT DPQSWKKPAP NPHAAEIRDS GVDVVVHSSY 
QINVASLNNR LRMPSRKAVE QQAAAAAELG AFGLVVHGGH LRDGEDSAEG FANWRKLFDR 
QVDKGGFGVP ILIENTAGGD HAMARTLESI DRLWEAVGDF EQAGFCLDTC HAWAGGEDLV 
GLVERIKAIT GRIDLVHLNN SRDEFDSGRD RHANLESGHI DPAVLAAVAA AADAPVILET 
PADGIPGDLA YLREALG