| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_4220 |
|---|
| Symbol | |
|---|
| ID | 8553601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | - |
|---|
| Start bp | 4519618 |
|---|
| End bp | 4520487 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | UspA domain protein |
|---|
| Protein accession | YP_003275265 |
|---|
| Protein GI | 262204057 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.686515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTCA ACGCGCCGAT CGTGGTCGCG GTGGACGGAT CGGAACAGGC CTCCAATGCT
GTGCGGTGGG GTGCGCGGGC GGCTGTCCGG GCGAACCGTC CGTTGCACAT CGTGAGCGCA
GTGGCACCAC CGGCGGCCGC GTTCACCCTG GCCGCGGTGT CGGTTGCGCA ATCGGCGGCG
ACCGCCGGGC GGGCCTTTGC CGAGACGGCC GTGGAACTGG CGAAAGGACT CGCCGAGGAC
ACCGCCGACG GGGTGACGGT CACCGGCGAG GTCATCGAGG GCAAACCCGC ACTGGCACTT
CGGGACATCT CCAGCCGCGC GCACAATCTG GTCGTCGGCA AGCGCGGGCT CGGCGGGGTG
AGCGGACTGC TGCTCGGTTC GGTCAGCACG CACGTTGCGG CGCATGCCGA ATGCCCGGTG
GTGGTGGTCT CCGACACACT CCCCACCAGC GGACCGGTCG TGGTCGGCGT CGACGGCTCA
CCGACCTCGA CAGACGCCAT CGCGCAGGCC TTCGCCCAGG CGGCGATCCT GAACGCCACG
CTGGTCGCAG TGCATTCCTA CGGCGGTTTC TCCAGTGCGG CGTTCTACGA CGCGGGTGAA
AAAGTGTTGC GCCAGTTGCA CGATGAAGCC GAGGAGACGC TCGGTGCGCA GTTGGCCGGT
TACGGTGAGG ACTACCCGGA TGTCATCGTC GAGCACGTGA TCACCGCCGA TGCCCCGTCG
ACGCGGATCG CCGAGCTGTC CGCCCAAGCA CAGCTCGTGG TGATGGGCAG CCGCGGACGC
GGTGGATTTC GCGGGCTGCT GCTGGGCTCC ACCAGCCAGG CCGTTCTGCA CGTCGCCGAC
TGCCCGGTGA TGGTCGTGCA GGGTTCGTGA
|
|---|
| Protein sequence | MPVNAPIVVA VDGSEQASNA VRWGARAAVR ANRPLHIVSA VAPPAAAFTL AAVSVAQSAA
TAGRAFAETA VELAKGLAED TADGVTVTGE VIEGKPALAL RDISSRAHNL VVGKRGLGGV
SGLLLGSVST HVAAHAECPV VVVSDTLPTS GPVVVGVDGS PTSTDAIAQA FAQAAILNAT
LVAVHSYGGF SSAAFYDAGE KVLRQLHDEA EETLGAQLAG YGEDYPDVIV EHVITADAPS
TRIAELSAQA QLVVMGSRGR GGFRGLLLGS TSQAVLHVAD CPVMVVQGS
|
|---|
| |