| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_3490 |
|---|
| Symbol | |
|---|
| ID | 8552868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 3706636 |
|---|
| End bp | 3708156 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003274576 |
|---|
| Protein GI | 262203368 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0668843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACC TGCCCTTCGG CTTCTCCGCG TCCGGTGACG ACGACGATCG TCGTAAAGAC
CCCGACGGCA AGGGCGGCGG CGAGGGCGGG GGCAAGGGTG GTGGCGAACA GAAGCCCGGT
ACCGGCGACA ATCCGTTCGG ATTCCCGTTC GGCCAAGCAG GTTCCGGCGG GTTCGACCCC
TCCTCCTTTG ATCCGTCCGC GTTCGATCCT TCTGCCATGG ACCCGGCCGC ACTCGGCCAG
ATGTTCTCCC AACTCGGCAG CATGCTGAGC GGAATGGGCA CCGGCGTCAC CGGCGGAGCG
GGTCAGGGCC CGGTCAACTT TCAGGTGGCC ACCAATCTGG CACGCCAGCA GATCGGTTCG
TTCACACCGG TTCTCGCCAA GGAGACCAAC GCCGTCGCCG ACGCGGTGCG ACTCGCCGAG
GTGTGGCTCG ACGATTCGAC GACCCTGCCC AGCGGGGTCG GCCGGTCGGT CGCGTGGACT
CCGGTGCAAT GGCTCGAGGA GACCCTGCCG ACCTGGAAGG GGCTGTGCAA TCCAGTCGCC
GAACAACTCG CGCGGACCTG GCAGGACAAT CTGCCCGCCG AGGCCGCCCA GTTCGCCGGG
CCGATGATGG GCATGCTGAC CCAGATGAGC GGGATGGCCT TCGGCACCCA GCTGGGTCAG
GGTCTCGGCC AGCTCGCCAA GGAGGTGCTC ACCTCCACCG ACATCGGTCT GCCGCTGGCC
CCCGAGGGCG TGGCCGTGCT GCTGCCCGAG GCCATCGCGA AGTTCGCCGA AGGGCTCGAA
CAGCCCGCCC AGGAGATCAT CGTGTTCCTC GCCGCCCGCG AGGCCGCACA CGTCCGGTTG
TTCACCCACG TCGGCTGGCT GCGGCAGCGC CTGCTGTCGA CGGTGGAGGA GTACGCCCGC
GGTATCAGCG TCGACTTCAG CGGGATCACC GACGCCACCG CCAACATCGA TCCCACCGAA
CTGTTCTCCA ATCCGGCCAA GCTCGAGGAA CTGATCAGCT CGTCGGCCTC CTTCGAGCCG
ACGACCACAC CCGAGCAGAA GGCGGCACTC AACCGGCTAG AAACGTTGCT CGCGCTGATC
GAGGGGTGGG TTGAGCAGGT CGTCGGACAG GCCCTCGGTG ACCGTATCCC CAGCACCGGC
GCACTCACCG AGACGATGCG CCGCCGGCGT GCGTCCGGCG GCCCGGCCGA GCAGACCTTC
GCCACCCTGG TCGGGCTGGA ACTGCGGCCC CGCAAGGTAC GCGAGGCGTC GGATCTGTGG
CGCAAACTCT TCGAGGCCGC CGAGAAGTCC GGCACATCAG GCATCACCGT GCGTGACGGG
GTGTGGGCAC ATCCGGACCT GATGCCCGAC GCCGACGACC TCGACAACCC GGCAGGTTTC
ATCGACCGCG TGATCGGCGG TGGCGACGAA TCCCTCGCCG ACGCGATCGC CGAACTCGAG
AAATCCCTGG CCGACGAGGC GGGCGACACC ACCGACACCA CCGATTCCGA CAACCCGGAC
GATCCACCGA CACGACCCTG A
|
|---|
| Protein sequence | MTDLPFGFSA SGDDDDRRKD PDGKGGGEGG GKGGGEQKPG TGDNPFGFPF GQAGSGGFDP
SSFDPSAFDP SAMDPAALGQ MFSQLGSMLS GMGTGVTGGA GQGPVNFQVA TNLARQQIGS
FTPVLAKETN AVADAVRLAE VWLDDSTTLP SGVGRSVAWT PVQWLEETLP TWKGLCNPVA
EQLARTWQDN LPAEAAQFAG PMMGMLTQMS GMAFGTQLGQ GLGQLAKEVL TSTDIGLPLA
PEGVAVLLPE AIAKFAEGLE QPAQEIIVFL AAREAAHVRL FTHVGWLRQR LLSTVEEYAR
GISVDFSGIT DATANIDPTE LFSNPAKLEE LISSSASFEP TTTPEQKAAL NRLETLLALI
EGWVEQVVGQ ALGDRIPSTG ALTETMRRRR ASGGPAEQTF ATLVGLELRP RKVREASDLW
RKLFEAAEKS GTSGITVRDG VWAHPDLMPD ADDLDNPAGF IDRVIGGGDE SLADAIAELE
KSLADEAGDT TDTTDSDNPD DPPTRP
|
|---|
| |