Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_3489 |
Symbol | |
ID | 8552867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | - |
Start bp | 3705432 |
End bp | 3706499 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | secreted protein containing a PDZ domain-like protein |
Protein accession | YP_003274575 |
Protein GI | 262203367 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.154798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCTGC AGGCACGGTA TCGCCGGATC GCCACGGTCG CCGTCACCGC GGTGGTTCTC GTGGTGCTTC TGCTCCTCGG GACCCGGGTC CCGGTGCCCT ATGTCGCCCT CGGGCCGGGG CCGACCCTCA ACACGCTGGG AACCGCCAAG GTGCGCGAAC CCGACGGCAA GGTCGAGGAA CGTCCGATCG TCTCCATCCA GGGTGTGCCG ACCGACAAGA CCTCCGGGAA CCTGAACCTG ACCACCGTGT CGGTGACCGA CAACCTCAGC CTCTTCGAGG CGATGGGGAT GTGGGTGTCC GGTGAGTACC AGCTGCAGCC GCGCGACCGC GTCTACGACC CGGACAAGAG CACCGAGGAG GTGCAGCAGG AGAACGTCGC GCAGATGACC GGGTCGGAGG ACGATGCGAC GGCGGCGGCT CTGCGCTTCC TGAACCGGCC GACGAAACTG GTGATCGGCT CGCTGACCGG TGGCGGTCCG TCGTCGGACG TTCTGAAACT CGGTGATCAG GTGATCCGCG TGGCCGGCAC CCCGGTGTCG ACGAGCGAGG AGTTCGCGAC CGCGGTGAGC AAGGCCAAGC CGGGGCAACC GCTGACCCTC GACATCGTGC GCGGCACCAC GCCGATGACG GTGACGGTGA CCCCGCGTCG CGACGCCGAC GACCAGAATG CCGGCGACAT CGGTGCGCAG GGCAGCGTGG TCAATGCCGA TCCGGCCCTG AAGATCACCT ACTACGTCGG CAACATCGGC GGGCCGTCGG CGGGAATGAT GTTGTCGCTG GCCGTGATCG ACCTGCTGAG CCCCGGTGAA CTGACCCATG GCAAGTTCAT CGCCGGTACC GGTACCATCT CCGACACCGG TGAGGTGGGC GTCATCGGCG GGATCACGCA CAAGACGCGC GCGGCTCGTG ATGCCGGGGC CACCGTTTTC CTCGTTCCCG ACGGCAACTG TACCGAGGCC GCCTCGGACC GGCCGGACGG GCTCGAGCTC GTGAAGGTCG ACACGTTGCA GTCGGCCGTC GACTCGCTCA ACGCGCTCGG GCAGGGTCGC CCGGTCGCGC AGTGCTGA
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Protein sequence | MMLQARYRRI ATVAVTAVVL VVLLLLGTRV PVPYVALGPG PTLNTLGTAK VREPDGKVEE RPIVSIQGVP TDKTSGNLNL TTVSVTDNLS LFEAMGMWVS GEYQLQPRDR VYDPDKSTEE VQQENVAQMT GSEDDATAAA LRFLNRPTKL VIGSLTGGGP SSDVLKLGDQ VIRVAGTPVS TSEEFATAVS KAKPGQPLTL DIVRGTTPMT VTVTPRRDAD DQNAGDIGAQ GSVVNADPAL KITYYVGNIG GPSAGMMLSL AVIDLLSPGE LTHGKFIAGT GTISDTGEVG VIGGITHKTR AARDAGATVF LVPDGNCTEA ASDRPDGLEL VKVDTLQSAV DSLNALGQGR PVAQC
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