| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_3480 |
|---|
| Symbol | |
|---|
| ID | 8552857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 3694598 |
|---|
| End bp | 3696220 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain protein |
|---|
| Protein accession | YP_003274566 |
|---|
| Protein GI | 262203358 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA CGGCCACAGA CACGCTCACC CTGTCCACCG ACGTCCTGGT CATCGGTGGT
GGGCCGGCCG CCACCTGGGC GGCCATCAAT GCCCGCGACA ACGGCGCGGA GGTGGTGCTC
GTCGACAAGG GCTACTGCGG AACCTCCGGG GCGACCGCAC CGGCCGGCAC CGGGGTCTGG
TACGTGGCAC CCGAGGCGCA GGCACGCGCG TCGGCGAAAG CGAGCAGGGA ACGCCTGGGC
GGGAATCTCG CCGACCATGA TTGGATGGAC CGCGTCCTGG ATCAGACCTA CGCCAACATG
CACCGGCTGG GTACCGAGGG ACGCTACCCG TTCCCGGTGA GCAAACGCAC CGGGGAGGCC
ATCCGCACCG GGGTGCAGGG TCCGGAGTAC ATGCGCCGGA TGCGGGCCTG GGTGCAGCGC
CGTGGTGTCA CGATCCTCGA CCACTCCCCC GTCCTGCAAC TCCTCACCGA CCGCGACGGT
CGGGTTGCCG GAGCCGCCGG ACATCAACGA CAGTCCGGCC GCGACTTCCG GATCTCCGCG
CGCACAGTGG TTCTGGCGAC CGGCGGCTGC GCGTTCCTGT CCCGCGCCCT CGGCACCAAC
GTCAACACCG GTGACGGTGC GTTGATGGCC GCCGAGGTGG GTGCCCACTT CTCCGGGATG
GAGTTCGCGA ACGCGTATGC GATCGTGCCG AAGGGCTCGA CGGTGACCAA GACCGCCTAC
TACGGGTACG CCACCTTCTA TCACGCCGAC GGGCGGGTGG TCGACGGTGC CGGTTCCACC
AAGGGCCGGT CGGTCATCGC TCGGACACTG CTCGACGAGC CGGTGTATGC CCAGTTGGAC
CGCGCCGACG ACACCGTGGC CGCGCAGATG CGGCTCGGCC AGCCGAATTT CTTCCTGCAG
TTCGATCGTC GCGGAATCAA TCCGTTCACC GATCGCTTCG AGGTGGACCT GCTGGCCGAA
GGCACCGTGC GCGGTACCGG CGGCATCGAT CTCGTCGACT TCGATTGCGC CACCGTCGTT
CCCGGCCTGT ACGCAGCCGG CGACGCGGCG ACCCGCGAAC GCATCTGCGG TGGATTCACC
GGTGGTGGCA GCCACAATTC GGCGTGGGCG ATGTCGTCGG GCAGCTTCGC CGGCGCCGCC
GCGGCTCGAG CCGCACTCCG GTCGTCGAGG CCGGCACTGG CCGACCTCCG AGGAGCCGGG
ACCGTCGCGC TCGCACCGGC CTCTGGCGGA TGGCGCCCGG CCGAGGCACT CACGCAGGCC
CAGTCGCACC TGATCCCATT CGAGAAGAAC TATCTGCGGC ACGGCGATCG GATGAGCAGC
GCGCTCGCCG GACTCGATGA TCTGTGGAAC CAACTGTCCG CGAGCGACTT CGACGCACCA
GATGCGGCCA CCCGGTTGCG TGCGCGTGAG GTCGCCGCGA TCACCGCGGT CGGACGGTGG
ATCTATTCGT CTGCCCTGTA CCGCACCGAA ACCCGCGGGA TGAGCAAACG CGAGGACTTC
CCGGGGCAGG ACCCGGAGCA ACGCGGCCAT GTCCACACCG GTGGTCTCGA CGACGTATGG
GTACGACGGG CGCGGGCGCT GCCGCGGTCG CGGAAGTTCG ACGCGGTCGG GGCCGTCGCA
TGA
|
|---|
| Protein sequence | MTATATDTLT LSTDVLVIGG GPAATWAAIN ARDNGAEVVL VDKGYCGTSG ATAPAGTGVW
YVAPEAQARA SAKASRERLG GNLADHDWMD RVLDQTYANM HRLGTEGRYP FPVSKRTGEA
IRTGVQGPEY MRRMRAWVQR RGVTILDHSP VLQLLTDRDG RVAGAAGHQR QSGRDFRISA
RTVVLATGGC AFLSRALGTN VNTGDGALMA AEVGAHFSGM EFANAYAIVP KGSTVTKTAY
YGYATFYHAD GRVVDGAGST KGRSVIARTL LDEPVYAQLD RADDTVAAQM RLGQPNFFLQ
FDRRGINPFT DRFEVDLLAE GTVRGTGGID LVDFDCATVV PGLYAAGDAA TRERICGGFT
GGGSHNSAWA MSSGSFAGAA AARAALRSSR PALADLRGAG TVALAPASGG WRPAEALTQA
QSHLIPFEKN YLRHGDRMSS ALAGLDDLWN QLSASDFDAP DAATRLRARE VAAITAVGRW
IYSSALYRTE TRGMSKREDF PGQDPEQRGH VHTGGLDDVW VRRARALPRS RKFDAVGAVA
|
|---|
| |