| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_3334 |
|---|
| Symbol | |
|---|
| ID | 8552709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | - |
|---|
| Start bp | 3563524 |
|---|
| End bp | 3564528 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003274431 |
|---|
| Protein GI | 262203223 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.150349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCTCG ACCTCGACGA CGTCACCGTC CGCTACGGCA CCGAGGCCGC GGTCGACGGA
CTGCGCTGGC GGGTCGGGCC GGTGGTGAGT GCGCTACTCG GCCCGTCCGG ATGCGGAAAA
TCGACGCTGA TTCGCGCCAT CGCCGGCCTG GAACCCCTTG CGCGCGGGCA TATCCGGTTC
GACGGGGAGG ACCTGGCCGA CGTCGCGGTG CACCGGCGCG ACTTCGGCGT GGTCTTCCAG
GATGGGCAAC TGTTCGGCGG GCGGACCGTC GCGGCGAACA TCGCTTATGG ACTGCGGATG
CGGCGATGGC CGCGGGCGCG GATCGCCGAA CGTGTCGAGG AGATGCTGCA CCTGGTGGAC
CTGCCGGGTT TCGCCGATCG TCGCGTCGGT GAACTCTCCG GCGGACAGGC ACAACGGGTG
GCGCTCGCCC GAGCCCTGGC ACCGCGGCCG CGTCTGCTGC TCCTCGACGA GCCGCTCGCC
GCCCTCGACC GTGGCCTACG CGACCAGCTG GCCCTCGACA TCGCCGCCAT CGTCCGGGAG
ACCGCGACAC CCACCATCGT CGTCACCCAC GACCACACCG AGGCAGCGTT GATGGCCGAC
GAGATCTCGG TCATGCGGGC GGGCGTGATC GTGCAGACCG CATCCCCGCG GGATCTGTGG
CAGCAGCCGA CCGACGAGTG GACGGCACGA TTCCTGGGGT GCCGCACCAT CATCGACGCG
GACGTCGTCG ACGCGACGGC GAGCACCGAC CTCGGTTCGG TGCGGCTCGA CGTCGCCGAC
GGACATCATC GGATCGGGCT GCGGGCGGAC TCGGTGGAAC TGGGCGCGGG GGCCGGTGAC
GGCGTTGCGG CCACCGTGCT CACCGTCGCG GACCTGCCGG CGGGTCGCCT GGCCCGCGTC
GCGACCGGCA TCGGCGAGAT CGAGGTGATG ACCTCCGGGC TGCCGGCTGT CGGTGACGTC
GTCACGGTGT GCCTCAATGG TTCTCGGGTT GCCGTGATCG GCTGA
|
|---|
| Protein sequence | MLLDLDDVTV RYGTEAAVDG LRWRVGPVVS ALLGPSGCGK STLIRAIAGL EPLARGHIRF
DGEDLADVAV HRRDFGVVFQ DGQLFGGRTV AANIAYGLRM RRWPRARIAE RVEEMLHLVD
LPGFADRRVG ELSGGQAQRV ALARALAPRP RLLLLDEPLA ALDRGLRDQL ALDIAAIVRE
TATPTIVVTH DHTEAALMAD EISVMRAGVI VQTASPRDLW QQPTDEWTAR FLGCRTIIDA
DVVDATASTD LGSVRLDVAD GHHRIGLRAD SVELGAGAGD GVAATVLTVA DLPAGRLARV
ATGIGEIEVM TSGLPAVGDV VTVCLNGSRV AVIG
|
|---|
| |