Gene Gbro_3250 details

Gene Information

• Locus tag: Gbro_3250
• ID: 8552625
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gordonia bronchialis DSM 43247
• Kingdom: Bacteria
• Replicon accession: NC_013441
• Strand: -
• Start bp: 3479267
• End bp: 3481342
• Gene Length: 2076 bp
• Protein Length: 691 aa
• Translation table: 11
• GC content: 66%
• Product: DNA ligase, NAD-dependent
• Protein accession: YP_003274348
• Protein GI: 262203140

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAGACA GCTCCGAGCA CCAGGACATC AGCGCCGACC TCCGCGAACA GTGGTCGACG 
CTCGCCGACG AGATCCGCGA GCACCAATTC CGCTACTACG TGAAGGATTC GCCGGTCATC 
ACCGACGGCG AGTTCGACGC CCTGCTGCGC CGCCTGCAGG ACCTCGAGGA CGCTCATCCG 
GAGTTGGCGG CGCCCGATTC GCCCACCAAA CTCGTCGGCG GCGGATTCTC CACCGCATTC 
ACCCCGGTCG ACCATCTCGA GCGAATGATG TCGCTGGACA ACGTCTTCGA CTACGACGAG 
ATGCGCACCT GGGTCGAGCG GGTGAACGCC GACGCGGGGA CATCGGTGGA GTTCCTGTGC 
GAGCTGAAGA TCGACGGCGT GGCGCTGGCC CTGGTCTACG AGAAAGGTGT GCTGGTGCGC 
GGTGTCACCC GTGGTGACGG CCGCACCGGC GAGGACGTCA CCCTCAACGC CCGGACCATC 
GACGATGTGC CACAACGTCT CACGGCCTCC GACGAGTACC CGATCCCCGA CGTGCTGGAG 
GTGCGCGGCG AGGTCTTCTT CCGGGTCGAG GACTTCGAGG CACTCAACGC GTCCCTCGTC 
GCCGACGGCA AGGCGCCGTT CGCGAATCCG CGCAACTCCG CGGCGGGGTC GTTGCGGCAG 
AAGAATCCGC AGATCACCGC CCGGCGCCGA TTGCGGATGA TCTGCCACGG CATCGGCCAC 
ACCGAGGGCT GGCGCCCGGC GTCACTGCAC GATGCCTACC TGGCACTGGG CGCCTGGGGT 
CTGCCGGTGT CCACGCACAC GACCAAGGTG CCTGGTGCCG ATGAGATCCT CGAGAAGATC 
GGGTACTGGG GCGAACACCG CCACGACGTC GAACACGAGA TCGACGGCAT CGTGGTGAAG 
GCCGACGACG TCAGCGTGCA ACGACGATTG GGCGCCACCT CGCGCGCGCC GCGGTGGGCC 
ATCGCCTACA AATACCCGCC GGAGGAGGCG ACCACCGAAC TCCTCGACAT CCAGGTCGGC 
GTCGGGCGCA CCGGACGGGT CACCCCGTTC GCCGTACTCG CGCCGGTCCT CGTCGCCGGC 
TCGACGGTCT CGCGCGCCAC TCTGCACAAC GAGTCCGAGG TGAAACGTAA GGGGGTGCTG 
ATCGGTGACA CCGTGACCAT TCGCAAAGCC GGCGACGTCA TCCCCGAGGT CCTCGGACCG 
GTCGTCGACC TTCGCGACGG CACCGAACGC GCGTTCGTGA TGCCGGACAG ATGCCCGGAA 
TGCGGTGCGC CCCTTCGGCC GGAGAAGGAC AGCGACGTCG ACATCCGTTG TCCCAATCAG 
GAAACCTGTC CCGCGCAGTT GCGGGAGCGG TTGTTCCATC TCGCGGGCCG CGGCTCCTTC 
GACATCGAGG CACTGGGCTA TGAGGCGGCG ACCGCGCTGC TGAATGCGAA GGTCATCACC 
AATGAGGGCG ACCTGTTCTC GCTGACCGCC GACGACCTCG CGCGCACCGA CCTGTTCACC 
ACCAAGGCAG GCGCGTTGTC GGCCAACGGT AAACGGCTGC TGGCGAACCT GGAGAACGCG 
AAGCAGGTGC CGTTGTGGCG GGTGCTGGTG GGGTTGTCGA TCCGTCACGT CGGGCCGACC 
GCCGCGCGGG CACTGGCCAC CGAATTCGGT TCGCTGAATG CGATCGAAGA CGCCGACGTG 
GAGCAACTCG CCGGGGTCGA GGGACTCGGC ATGACCCTCG CGCAGAGCAT CCACGACTGG 
TTTGCCGTCG ACTGGCACCG GGAGATCGTC GAGAAGTGGC GTGCCGCCGG GGTTTCCATG 
GAGGACGAGC GTGACGATTC GATCGTGCGG ACCCTGGAGG GCAAGACTAT CGTCGTCACC 
GGTTCTCTCG AGGACTTCTC TCGGGACGGC GCCAAGGAGG CGATCCTGCA GCGCGGCGGA 
AAGGCCTCGG GCTCGGTGTC GAAGAAGACC GATTATGTGG TGATCGGTGA GTCGCCAGGC 
AGCAAAGCGG CCAAGGCCGA GCAACTCGGG GTGCCCGTTC TCGACGAAGA CGCGTTCAAG 
AGACTGCTCG AGACCGGTGA TCCCGGTATC GACTGA 

 

Protein sequence

MADSSEHQDI SADLREQWST LADEIREHQF RYYVKDSPVI TDGEFDALLR RLQDLEDAHP 
ELAAPDSPTK LVGGGFSTAF TPVDHLERMM SLDNVFDYDE MRTWVERVNA DAGTSVEFLC 
ELKIDGVALA LVYEKGVLVR GVTRGDGRTG EDVTLNARTI DDVPQRLTAS DEYPIPDVLE 
VRGEVFFRVE DFEALNASLV ADGKAPFANP RNSAAGSLRQ KNPQITARRR LRMICHGIGH 
TEGWRPASLH DAYLALGAWG LPVSTHTTKV PGADEILEKI GYWGEHRHDV EHEIDGIVVK 
ADDVSVQRRL GATSRAPRWA IAYKYPPEEA TTELLDIQVG VGRTGRVTPF AVLAPVLVAG 
STVSRATLHN ESEVKRKGVL IGDTVTIRKA GDVIPEVLGP VVDLRDGTER AFVMPDRCPE 
CGAPLRPEKD SDVDIRCPNQ ETCPAQLRER LFHLAGRGSF DIEALGYEAA TALLNAKVIT 
NEGDLFSLTA DDLARTDLFT TKAGALSANG KRLLANLENA KQVPLWRVLV GLSIRHVGPT 
AARALATEFG SLNAIEDADV EQLAGVEGLG MTLAQSIHDW FAVDWHREIV EKWRAAGVSM 
EDERDDSIVR TLEGKTIVVT GSLEDFSRDG AKEAILQRGG KASGSVSKKT DYVVIGESPG 
SKAAKAEQLG VPVLDEDAFK RLLETGDPGI D