Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_2789 |
Symbol | |
ID | 8552153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | - |
Start bp | 2976082 |
End bp | 2976897 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | Shikimate dehydrogenase substrate binding domain protein |
Protein accession | YP_003273899 |
Protein GI | 262202691 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.557365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCATTC TCAACAAGGA CATGACCCTG TGTATCTCGT TGTCGGGCCG ACCGTCGAAT ATCGGTACCC GATTCCACAA CTATCTCTAT GACGAACTCG GGCTGAACTG CATCTACAAG GCGTTCGGCA CCGACGACAT CGAAGGCGCG ATTCGTGGCG TTCGGGCGCT CGGTATCCGC GGCACATCGG TGTCGATGCC GTTCAAGGAG GCGGTGATCC CGCTCGTCGA CGAACTCGAG GAGTCGGCAT CGGCCATCGA GTCGGTCAAC ACCATCGTCA ACGACGACGG CCGGCTGGTC GCCTCGAACA CCGACTACGA GGCGGTGGCA CAGCTGATCG CCGAGCACTC CCTGGATCCG TCCGTTCCGG TCGTCGTGCG CGGTTCGGGA GGAATGGCCA AAGCGGTGGT CGCGGCGTTC CGCGGGGCGG GTTTCGATAC GCTCACCGTG CTCGCCCGCA ACCAGGAGGC CGGATCCGAA CTGGCTGCGA AGTACGGGTA CGAGCACACC GTGGCCGAAC CGGCGCCCGC GGACGTCATC CTGGTGAACG TGACCCCCAT CGGGATGGCC GGAGCCGACG AGGCGGCGCT GTCGTTCTCG GCGGAGCAGA TCGCCGCCGC GCGCGCCGCC TTCGACGTGG TGGCGTTCCC GGCCGAGACC CCTTTCATCA TTGCCGCGCG GGGTGCGGGC ACACCGGTGA TCACCGGCGC CGAGGTGATC GCGTTGCAGG CCGCCCGCCA GTTCGAGCGC TACACCGGCG TCGAGATCAC CGCCGACCAG GTGGCGCGTG CGTCTGCGTT CTCCCGCGAG GTCTGA
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Protein sequence | MPILNKDMTL CISLSGRPSN IGTRFHNYLY DELGLNCIYK AFGTDDIEGA IRGVRALGIR GTSVSMPFKE AVIPLVDELE ESASAIESVN TIVNDDGRLV ASNTDYEAVA QLIAEHSLDP SVPVVVRGSG GMAKAVVAAF RGAGFDTLTV LARNQEAGSE LAAKYGYEHT VAEPAPADVI LVNVTPIGMA GADEAALSFS AEQIAAARAA FDVVAFPAET PFIIAARGAG TPVITGAEVI ALQAARQFER YTGVEITADQ VARASAFSRE V
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