Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_2544 |
Symbol | |
ID | 8551908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | + |
Start bp | 2731242 |
End bp | 2732165 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | Squalene/phytoene synthase |
Protein accession | YP_003273677 |
Protein GI | 262202469 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.11325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGTCA GCGTGCGACC ACCGACCCAG TCCGACGACA CACGGCCCTA TCACCACTAC GACGATGTTG CCGACGAGAC CGCGGCGCTG GTGATCAGCT CCTATTCGTC GTCGTTCGGG CTGGCGTCAC GCCTGCTCGC GAAACCGGTG CGCCGGGACG TGCACAACAT CTACGCGCTC GTCAGGGTGG CCGACGAGAT CGTCGACGCC CCCCGGCCCG ATCAAACCGA AACGCAACGG CGCCAGGCGC TCGACGCCCT CGAGACCGAG GTCATCGCGG CCCTGCGCAC CGGGTCGAGT TCCAATCTGG TCGTACACGC CTTCGCCCGC ACCGCCCGCC GCACCGGCAT CGACGCCGCC CTGGTGGCCC CGTTCTTCGC GTCCATGCGC GCCGACCTGG ACTGTGCGGT GCACGACGAG CAGAGCCTGG CCGACTACAT CTACGGTTCG GCCGAGGTGG TGGGGCTGAT GTGTGTGCAT GCCTTCCTGT CCGACCACCC GCACCGCAAG GCGCGTTACG ACCAGCTCGC GCCCGGCGCA CGCCGCTTGG GCGCGGCGTT CCAGAAGGTC AACTTCCTGC GTGACCTGGG CGAGGATGCC GGCCAGCTGG GCCGGCGCTA CCTCGTCGGA CTCGATCCCG ATCACCCCAC CGAACAGGCC TGGCAGCACT GGCTCGACGA CATCGACGCC GACCTCGCTG CCGCCGCGAG AACGATTCCG TTGTTGCCCA ACGGCACTCG GGTTGCTGTG TGCACCGCAC ATGACATCTT CGCCGATCTA TCCCGCCGGT TGCGGGCGAC ACCGCCCGCG CAGGCCTGCC GCACCAGGGT TCGCGTTCCT GGACGCGAGA AGGCACGGAT CGCGGCAGCG GCCGCCCTCC GGCGCGGCAA CCCACGCGTC ACAGCGCAGG CCCCGGCGTC GTGA
|
Protein sequence | MTVSVRPPTQ SDDTRPYHHY DDVADETAAL VISSYSSSFG LASRLLAKPV RRDVHNIYAL VRVADEIVDA PRPDQTETQR RQALDALETE VIAALRTGSS SNLVVHAFAR TARRTGIDAA LVAPFFASMR ADLDCAVHDE QSLADYIYGS AEVVGLMCVH AFLSDHPHRK ARYDQLAPGA RRLGAAFQKV NFLRDLGEDA GQLGRRYLVG LDPDHPTEQA WQHWLDDIDA DLAAAARTIP LLPNGTRVAV CTAHDIFADL SRRLRATPPA QACRTRVRVP GREKARIAAA AALRRGNPRV TAQAPAS
|
| |