Gene Gbro_2003 details

Gene Information

• Locus tag: Gbro_2003
• ID: 8551358
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gordonia bronchialis DSM 43247
• Kingdom: Bacteria
• Replicon accession: NC_013441
• Strand: -
• Start bp: 2121290
• End bp: 2123338
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 67%
• Product: Ceramidase
• Protein accession: YP_003273149
• Protein GI: 262201941

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.921318
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACATCA GTCGTAGGCG GGCACTCGGG GCTGCCGCAA CCCTCGGCGG CGGTGTCGCG 
CTGGGGGTGG GCGTCCGGAC CGTCGGCGCG GCGAGTGCGG CACCGCGCCC GGCCGACAGC 
ACGAACTATC TCGTCGGCTG CGGGATCGCG GACATGACCG GCGCCGTCGC GGGGCAGGGC 
ATGATGGGCT ACTCCGAGGC CGACCAGGTG GCCGAGGGCC TGCTCCAGCG ATGCTGGGCC 
CGTGCCTACA TCGTCGTCGA CGAGGCCATC GGCAGCCGCG TCGTCTTTGT CACCGCCGAC 
ATCGCCTGCC TGTTCCAATC GCATCACATG GGCCTGATGC CCAGGCTGCG TGCCCGGTTC 
GGGTCGCTCT ACACCGAACG CAACGTGAAC CTCAACGCCA CCCATTCCCA CGCGTCCTGC 
GGAGGAACCG CCTGGGATTA CGCGTATTCA CTTGCGGCAT ACGGGTTCAA AAAGAATTCC 
TATGAGGCCG AGGTGGACGG CCTGTTCGCC GCGATCGTCC GTGCGCACGA GAACCTCGCA 
CCCGGTTCCA TCAGCATCGG CCGTGGCGAA CTCCACGATG CGAGCGCCAA CCGCTCGAAG 
GTCGCCTTCG ATCTCAACCC CGCATCCGAG CGCCGGCACT TCCCGTCGGC CATCGACCCC 
ACGGTGACTG TCCTGCGATT TCGGCAGGGC GGAAATGACA TCGGGGCTAT CACCTGGTTC 
TCCACGCACG GCACCTCGCT GACCGACCGC AACCGTCTGA TCGCCGGTGA CAACAAGGGC 
TACGCGAGTT ACCGCTGGGA GAGCACGCAA CCCGGCTTTG TCGCGGCGTT CCCGCAGACC 
AACTCGGGTG ACATGACACC CAACCTCAAC CTGATCAAGA TGCGGCCGAG CGGTCCCACC 
TTCGACAATC GGCGCAACTG CGCCATCATC GGGGAACGCC AGTATCTGGC CGGGCGCAAC 
GCATTCGACG GGGCACGCGC GATGAGCCGG GGCGGGGTCG ACTCGATTGT GCGCTACGTC 
GACATGTCGG CCGTCTCCAT CGATGCCGCC TACACCCCGG AAGGCCGGCC GGCACGGACC 
ACGCCGGCGA TGATGGGTGC AGCGGCCGCG GCCACCAGCA CCGAGGACAA CTACTATTCA 
CAACTACCCT TCCTGCAGGA AGGGGTCACC AATCCGCTCG TGGCCGCCTT CGGCGGTGAC 
CGACGTCCAC CGATCGCACC GTGGATGCGC GACATGCAGG CACCCAAGCT GATCTTGTTT 
CCACTCGGTT TGCTGCCGCC GTCGCCGTGG ATCCCGCAGG TCGTGCCGCT ACAGATCATG 
CGGATCGGTG AGTTGGTCTT GGTGGCCGTA CCCGCCGAGG TGACCATCGT CGCCGGGCTA 
CGACTGCGGC AGGTGGTCGC CGACGCCTTG CGCGTAGATC TCGACGACGT TCTGGTGCAA 
GGCTATTCGA ATGCCTACAC CCAGTACGTG ACCACTCCCG AGGAGTATGA CGCCCAGCAG 
TACGAAGGCG GGGAAACCCA GTTCGGGCGG TGGACCCTGT CGGCCTACAT GCAGGAGTTC 
GCCCGCCTCG CCGCCGCGAT GGCCACCGGC CGGCCGCTCG GCCGCGGTCC CGCTCCGCTG 
GACAAGTCCG CGGTGCAGCC CGATCTGCTG CCCGCCGTCC CACCCGACCG CCCCGTCGCC 
GGACGCCGCT ACGGCGATGT CCTGGTGAGT CCACGGTCCC GCTACCGCGC CGGCCAGCAG 
GTGGCGGTGA CCTTCGTGGG TGCCCACCCC AACAACGACT TCCGGCACGG TCGCACCTAT 
CTGGAGATCC AGCGCCGCGA GCGCACCGGG TGGCACACGA TCGCCGACGA CAACGACTGG 
TCCACCGAGT TCCGTTGGTC CCGACCCGCG GGCAGCTCCG ACGCCTCGCA CATCCGCATC 
ACCTGGACTC CCCCGCCCGG TACGTCGGGC ACCTATCGCG TCCGCTATCA CGGCAACAGC 
CGCGACGCCC GCGGTGTCGT TCGTGAGATC AGCGGCACCT CACGGGCGTT CGCTGTCGAC 
GCGAAATAG 

 

Protein sequence

MDISRRRALG AAATLGGGVA LGVGVRTVGA ASAAPRPADS TNYLVGCGIA DMTGAVAGQG 
MMGYSEADQV AEGLLQRCWA RAYIVVDEAI GSRVVFVTAD IACLFQSHHM GLMPRLRARF 
GSLYTERNVN LNATHSHASC GGTAWDYAYS LAAYGFKKNS YEAEVDGLFA AIVRAHENLA 
PGSISIGRGE LHDASANRSK VAFDLNPASE RRHFPSAIDP TVTVLRFRQG GNDIGAITWF 
STHGTSLTDR NRLIAGDNKG YASYRWESTQ PGFVAAFPQT NSGDMTPNLN LIKMRPSGPT 
FDNRRNCAII GERQYLAGRN AFDGARAMSR GGVDSIVRYV DMSAVSIDAA YTPEGRPART 
TPAMMGAAAA ATSTEDNYYS QLPFLQEGVT NPLVAAFGGD RRPPIAPWMR DMQAPKLILF 
PLGLLPPSPW IPQVVPLQIM RIGELVLVAV PAEVTIVAGL RLRQVVADAL RVDLDDVLVQ 
GYSNAYTQYV TTPEEYDAQQ YEGGETQFGR WTLSAYMQEF ARLAAAMATG RPLGRGPAPL 
DKSAVQPDLL PAVPPDRPVA GRRYGDVLVS PRSRYRAGQQ VAVTFVGAHP NNDFRHGRTY 
LEIQRRERTG WHTIADDNDW STEFRWSRPA GSSDASHIRI TWTPPPGTSG TYRVRYHGNS 
RDARGVVREI SGTSRAFAVD AK