| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_1460 |
|---|
| Symbol | |
|---|
| ID | 8550807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 1522407 |
|---|
| End bp | 1523882 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_003272633 |
|---|
| Protein GI | 262201425 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAT TCGAATCCCT CGGCGTGCCC GCAGAACTGG TGAAAGTTCT TGCCGCCGAA
GGTAAAACCG AAGCATTCCC GATCCAGCAG GACACCCTCG GTGACACCCT GGAGGGCAAG
GACGTCCTCG GCCGCGGCAA GACCGGCTCC GGCAAGACCC TGGCCTTCTC GATCCCGCTC
GTCGCCGGGC TGGCCGAGAT GGAGGTGCCC CGCAAGCCGG GCGCGCCCAC CGGCCTGGTC
CTCGCGCCCA CGCGCGAGCT GGCCACACAG ATCGCTCGCG TCGTCGAACC GCTCGCCGAG
GCCGTCGGCC TGCGTGTGAC CACCGTCTTC GGTGGTGTGA AGCAGACCCG GCAGGAGCAG
GCCTTCCGTC GTGGCGTCGA CATCGTCGTC GCCTGCCCGG GTCGCCTCGA CGACCTCATG
CGTCAGGGCA TCGTCACGCT CGATGACGTC GAGATCACCG TGATCGACGA GGCCGACCAC
ATGGCCGACC TCGGGTTCCT GCCCGTCGTC ACCCGCATCC TGGCCGCCAC CCCGGCCGAC
GGTCAGCGGA TGCTGTTCTC GGCCACCCTC GACAACGGCG TCGACAAGCT CGCGCGCCGA
TTCCTGGACA ACCCCACCAT GCATTCGGTC GACGAGGCCA ACTCGCCGGT TGCCGCGATG
ACCCACCACG TCTTCGAGGT CTCCCCGAGC GACAAGGCCG CACTCATCAC CGAACTCGCC
TCCGGCGCCG GGCGTCGAAT CCTGTTCATG CGCACCAAGC ATCAGGCCAA GAAGCTCGCC
CGCAAGCTCA CCGAGGACGG CATCCCCGCC GTCGACCTGC ACGGCAATCT CAGTCAGGCG
CAACGTGATC GGAACCTCGG GGCCTTCGGT GCCGGTGACG TCCGCGTGCT GGTCGCCACC
GACGTCGCGG CCCGCGGGGT GCACGTCGAC GACATCGAAC TCGTCGTCCA CGTCGACCCG
CCCAACGAGC ACAAGGCCTA CCTGCACCGG TCGGGCCGAA CGGCCCGCGC GGGCAGTGCC
GGTGACGTGG TCACCGTGTG CCTGCCGGAT CAGCGGCGCG ACGTCGCCTC CCTGCTGCGC
AAGGCCAAGA TCTCGGTGGC CCCGATGCCG GTGACGCCGC GGTCGGATGC GGTGACCGCA
CTCGTCGGCG AGCGTGCCGA ATTCGTTGCG CCGCAACCAG TCAAGCAGCA GCCCGCCCGC
CAGGGCGGCG GCGGGGGACA GCGTGGTTCC GGCCGTGGCC GTGGCGCGGG ACGCAGCGGT
GCCCCGCGTG GCAACGGCGG CTCGGGCTCG GGCGAGCACC GTGGTGCCCG TTCCGGCGAT
CGTCGACGCA GCCACACTTC GGGCGCAAGC GGTTCGGGCG CAAGCCGTTC GACGCGGCAG
TCGACGTCGG GACCCCGTTC GGGCAGCGTT GCCGAGGGCG GCGCGCACCG TCGCGGCAAC
CAGCAGCGTC GACGCGCGGT GCGCGCAGCC GGCTGA
|
|---|
| Protein sequence | MTTFESLGVP AELVKVLAAE GKTEAFPIQQ DTLGDTLEGK DVLGRGKTGS GKTLAFSIPL
VAGLAEMEVP RKPGAPTGLV LAPTRELATQ IARVVEPLAE AVGLRVTTVF GGVKQTRQEQ
AFRRGVDIVV ACPGRLDDLM RQGIVTLDDV EITVIDEADH MADLGFLPVV TRILAATPAD
GQRMLFSATL DNGVDKLARR FLDNPTMHSV DEANSPVAAM THHVFEVSPS DKAALITELA
SGAGRRILFM RTKHQAKKLA RKLTEDGIPA VDLHGNLSQA QRDRNLGAFG AGDVRVLVAT
DVAARGVHVD DIELVVHVDP PNEHKAYLHR SGRTARAGSA GDVVTVCLPD QRRDVASLLR
KAKISVAPMP VTPRSDAVTA LVGERAEFVA PQPVKQQPAR QGGGGGQRGS GRGRGAGRSG
APRGNGGSGS GEHRGARSGD RRRSHTSGAS GSGASRSTRQ STSGPRSGSV AEGGAHRRGN
QQRRRAVRAA G
|
|---|
| |