Gene Gbro_1238 details

Gene Information

• Locus tag: Gbro_1238
• ID: 8550583
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gordonia bronchialis DSM 43247
• Kingdom: Bacteria
• Replicon accession: NC_013441
• Strand: -
• Start bp: 1290627
• End bp: 1292618
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 71%
• Product: major facilitator superfamily MFS_1
• Protein accession: YP_003272427
• Protein GI: 262201219

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.19204
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCACCGAC CGAGTTCCCG ACAACACGAC GAGGGGCGCG GGGCCCCCGG AGGTCCGGCG 
AACCCGCACC CTGGCCACCC GGCCGATGAT CCCCGGCGAC GCCGTGGGTC CGATCATCGG 
GGTGCCGCCC ATCCCGGTAC GGCCAACTAC CCTGCCGAGG ACCCTGCCCC GCGACCGCGA 
CGGCCCGCAC CCGGTTGGGG TCCCGCCGCG GCCCCCGGAC CCGGCCGCAA GGCATATCTG 
CCGCCGCCGA CCCACAATCC GCACCTGCCG CCGCTGGACG ACGCCGACCA GCCCACCGAT 
GCCCGCACCG GCACCCGTGC GATGCCGACC GAGGCCACCG GACCGCGGAT GCCCAAGAAG 
CTCACCGTGA TGCGCGTCGC CGCCTTGCGC AGCCGTGAAC TCACCGGCCG CGGCATCGGC 
AAGATCCACC GCGCCGCAAC CGCCGACGGC GCCGACCAGT CCGGGCTCAC CGCGCTGACC 
CTGCCGGTGA TCGCCAACTT CGCCGTCGAC GCCGCCATGG CCGTCGCACT GGCCAACACC 
TTGTTCTTCG CTGCCGCGTC CGGCGAATCC AAGGTCAGCG TCGGGCTCTA CCTCGCACTG 
ACCATCGCCC CCTTCGCCCT GATCGCCCCA CTCATCGGCC CGCTTCTGGA CCGCTTGCAG 
CGCGGTCGGC GCATCGCGAT GGCGACCACC TTCGGACTGC GCGTCGTACT GGCACTGCTG 
ATCATGGCGA ACGTCTCCTG GGATGAGGCA GCCAAGCAAC TGAACTACGA CCCCTGGGTC 
CTCTATCCGT GCGCGCTGGG ACTGCTCGTG CTGTCCAAGT CGTTCGGTGT GCTCAAGTCG 
GCGGTCACCC CGCGCGTGGT GCCACCGACC ATCGACCTGC CGCGGGTGAA TTCGCGGCTC 
ACCATGTTCG GCCTGGTCGG CGGGACGATC ATCGGCGGCG CGATCGCCGG GTTGATCGAG 
ATCCTCCTCG CCAAGGCGCT GCCGTTCCAC CTGCCCGGCG CCATGCTGTG GCTGGCGATC 
GTCGCGGCGG CCGGCGCCTA CCTGTGCATG CGAATCCCGT CCTGGGTGGA GGTCACCGAG 
GGCGAGATCC CGACCACGTT CACCTACCAC GGCGAACCCG CCCGCTCGAG CGTCCCCGAA 
CACGAGGGCG TCCTGGGCAG CGCCAAGGAC GGCGCCAAGG GACTCGCGGC CAAGATGCGT 
CAGCCGCTGG GCCGCAAGGT GGTTGCGGGC CTGTGGGGCA ACGGCACCAT CCGCATCCTC 
ACCGGGTTCC TCACCCTGTT CATCGCGTTC TACGCCAAGG CGCAGCAGAC GGCGAACCCC 
GACGAGGGCG GGTTCACCCA GCTCCTGCTG ATCGGTGCGG TCGGCGCGGC CGCGGGCGTC 
GGGAACGCCC TGGGCAACGG CATCGGAACC CGCCTGGAAC TGAAGAATCC GCCCACCATC 
GTCGTCGGGT CGACGGCCGC CTGCTTCGTC GTCGCCGTGC TCGCCGCCAT CTTCGGCAAC 
GTGCTCGCCG CCTGCATCGC CGCGCTCGTC GCCTCCGGGA CGAGTGCCAT CGGCAAGGTC 
TGCCTCGACT CGTCGATCCA GGACGATCTG CCCGACGAAT CACGGGCATC GGCGTTCGGC 
CGGTCGGAGA CCGTCCTGCA GTTGTCCTGG GTGTTCGGGG CGTCGCTGGG CGTGCTGCTG 
CCGCCGTATC TGTGGCTCGG GTTCACCGTG GTCTCGGTAC TGCTCGGCAT CGGCCTGCTG 
CAGACGATCA TGACGTGGCG CGGGTCGTCG CTGGTACCCG GACTCGGTGG CCGGCGTCCC 
GACCACGCGA TGCCGACGAT GGCCTTCGCC GCCCCGACCA CCGATCGGCT GCGCGCCCAT 
CCGCGCACCG AACGCGCCGC CGGCCCGTCC GGTGCGCCCA CTCGCGCACA GCCACAGACT 
TATTCGCCGC GGGACCGCGG CGGGCACACC TCACACCCCG GCCACCGGCC CGACCACTCC 
GGGAAGCACT GA 

 

Protein sequence

MHRPSSRQHD EGRGAPGGPA NPHPGHPADD PRRRRGSDHR GAAHPGTANY PAEDPAPRPR 
RPAPGWGPAA APGPGRKAYL PPPTHNPHLP PLDDADQPTD ARTGTRAMPT EATGPRMPKK 
LTVMRVAALR SRELTGRGIG KIHRAATADG ADQSGLTALT LPVIANFAVD AAMAVALANT 
LFFAAASGES KVSVGLYLAL TIAPFALIAP LIGPLLDRLQ RGRRIAMATT FGLRVVLALL 
IMANVSWDEA AKQLNYDPWV LYPCALGLLV LSKSFGVLKS AVTPRVVPPT IDLPRVNSRL 
TMFGLVGGTI IGGAIAGLIE ILLAKALPFH LPGAMLWLAI VAAAGAYLCM RIPSWVEVTE 
GEIPTTFTYH GEPARSSVPE HEGVLGSAKD GAKGLAAKMR QPLGRKVVAG LWGNGTIRIL 
TGFLTLFIAF YAKAQQTANP DEGGFTQLLL IGAVGAAAGV GNALGNGIGT RLELKNPPTI 
VVGSTAACFV VAVLAAIFGN VLAACIAALV ASGTSAIGKV CLDSSIQDDL PDESRASAFG 
RSETVLQLSW VFGASLGVLL PPYLWLGFTV VSVLLGIGLL QTIMTWRGSS LVPGLGGRRP 
DHAMPTMAFA APTTDRLRAH PRTERAAGPS GAPTRAQPQT YSPRDRGGHT SHPGHRPDHS 
GKH