| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_1190 |
|---|
| Symbol | |
|---|
| ID | 8550531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 1245890 |
|---|
| End bp | 1247281 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003272387 |
|---|
| Protein GI | 262201179 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGCA GCGTTAAGAA GGACGCCGGA AGCTGGTACT ACGTCGTCGA CCTCGGGCGA
GACCCAGCCA CCAACAAACG CCGGCAAGAG CGCAAACGAG GATTCCGCAC CAAGCGGGAG
GCGGTAGACG CGCTCGATGA GCGTTTGAGT GAGGTGCGCA CCGGGATCGT CGCAGTCGAC
CAACGCCTCA CACTCGCCCA GTACCTCGCA TCATGGCTGA CCGCGAAGGA GCAGGCCGGG
ATTCGCGCAA CCACACTGCG CTCCTACCGT CAGCACGTCG ACAGTTACAT CGTGCCGACG
ATCGGCAACG TCCGGCTACG AGACCTTCGC GCGACCCACG TCGAGCACAT GCTTTCCGAG
ATCGCGAAGC CCCCGAAGAA GCCGGCAAAG GGTGTAGCCA TCGGGAAAGG GAAGCGACGC
AACCCAAAGG CATTGAGTCC AGCCACCCAG CGGCGCGTCC ACGCCACGCT GAGATCGGCG
CTCACCTCGG CCAAACGCAA ACACCTCGTC AGCTTCAATG CCGCGGCCGA CATGGAACTC
CCACGCGCCA GCCGACCAAA GGTCAAGCCT TGGGAAGCAT CAGACCTCGG TGCGTTCCTC
GACCACGCCA CCAAAGACCG CCTCGGCGCG TTCTTCGAAA CCATCGCCAT GACAGGTCTA
CGCCGGGGCG AAGCGCTCGG CATCCGCTGG CCCGATGTCG ACTTCGAGAA GGCGCGAGTG
ACCGTCAACC AACAGCTTGT CGAGGTCGAC GGCACCGGGA TTGACTGCCC GTTCTGCGGT
GGCGAGCACA AGCAGTTCCG TTTCGGTCCA TGCAAGACCG CCAGCGGCGA AGCACGCATC
GTCGACCTCG ACAGCGGCAC GCTCGGCGTA CTGATGGCGC AGCGCCTACG GCAGGAGCAA
GAACGTGAGC AGTGGGGTGA CGCCTACAAC GACCACCAAC TGGTATTCGC CCGCGAGGAC
GGTTCGCCGA TCCCGCCCGC CGACGTGACT GCCAAGTTCC ATGCCCTCAC CGACGAGGCA
GGATTGCGGC GTATCCGACT ACACGATCTG CGGCACGGTC AGGCATCGTT GATGCTCGCG
GCGGGTGTCC CGATCGCTGT GGTGTCGAAG CGCCTCGGGC ACTCGTCGAT CTCGATCACC
AGCGACACCT ACAGCCATCT TCTCGACGGC GTTGGCGCGG CGGCAGCAGA GGCGGCAGCC
GGTCTGGTGC CACGTGCGGG ACGTGACCAG AAGCGTGACC ACGAAAGTAC TTCGCACAGC
GAACGTGACC AATCGGTGAC CACCGAGGAC CAAAAACACC AAACAGGCGA CCCGCTCGAA
AGCGAATCGC CTGGTCAAGA TGGTGCCCCC TCTCGGGCTC GAACCGAGGA CCTGCGGATT
AAAAGTCCGT AG
|
|---|
| Protein sequence | MRGSVKKDAG SWYYVVDLGR DPATNKRRQE RKRGFRTKRE AVDALDERLS EVRTGIVAVD
QRLTLAQYLA SWLTAKEQAG IRATTLRSYR QHVDSYIVPT IGNVRLRDLR ATHVEHMLSE
IAKPPKKPAK GVAIGKGKRR NPKALSPATQ RRVHATLRSA LTSAKRKHLV SFNAAADMEL
PRASRPKVKP WEASDLGAFL DHATKDRLGA FFETIAMTGL RRGEALGIRW PDVDFEKARV
TVNQQLVEVD GTGIDCPFCG GEHKQFRFGP CKTASGEARI VDLDSGTLGV LMAQRLRQEQ
EREQWGDAYN DHQLVFARED GSPIPPADVT AKFHALTDEA GLRRIRLHDL RHGQASLMLA
AGVPIAVVSK RLGHSSISIT SDTYSHLLDG VGAAAAEAAA GLVPRAGRDQ KRDHESTSHS
ERDQSVTTED QKHQTGDPLE SESPGQDGAP SRARTEDLRI KSP
|
|---|
| |