Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_1135 |
Symbol | |
ID | 8550475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | + |
Start bp | 1193791 |
End bp | 1195032 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | virulence factor Mce family protein |
Protein accession | YP_003272336 |
Protein GI | 262201128 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAGTA AGCTCGCGAA GATCCAGCTG ATCGTGTTCG TGATCGTCGG TCTGGTTGCG ATCGTCTACG TCGGGGCCAA GTACGCGCGG CTGGACAAGC TCGCCGGTGT CGGTATGTAC AAGGTGGTCG CCGAACTGCC CGATTCCGGT GGCATCTTCA CCAACGCCGA GGTGACCTAT CTCGGTGTCC CGGTCGGCCG GGTGGGGCAG CTCAAGCTGA CCCAGAAGGG TGTCGACGTC ACGCTGGAAC TCAACTCCGG TGGCCCCGAC ATCCCGGCGT CGGCGGTTGC GGTGGTGGCC TCCCGGTCGG CGATCGGTGA GCAGTTCGTC GATCTGCAGC CCACGTCGAC GGGTGCGCCG TACCTCGCGG ACGGCTCGCG GATCACCAAG TCACAGTTGC CGCCGCCGCT GCAGGATGTG GTTGCCTCGG CGATCGACTT CACCTCGTCG ATCCCCGTCG ACGACCTGCA CACCGTGATC ACCGAACTCG GCAAGGCCTT CAACGGGCAG GGCGAGAACC TGACCCGGCT GGTCGACTCG CTGGGCAAAC TGTCCCGGGC CGGGGTGGAC AACATCGGCG CCACCGTGGA TCTGATCGAC AACTCGAACG TGGTCCTGCA GACGCAGGCC GAGCAGTCCG ACGAGATCCT GGCGTGGTCG CGCAGCATCA ACCTGATCAC CGCGACCCTG CAGTCCTCCG ATCCGGACCT GCGCCGGTTG CTGACCACCG GCACGCTCTC GGCGACGCAG ATCTCCAACC TGATCCAGCG CAACGGCGGG GACCTGTCCA AGGTGGTGAA GGATCTCGGT GAGGTCGCAC GCACCGTCCA GCCGGCGGGC TATGCGACGT CGACGACGTT CGCGATGCTG TCGGCGCTGT CGGCGGGCAG CCACACCCCG GCTCCCGGCG ACGGGCAGAT CCACTTCGGC GTGGTGCTCG AGACCAACAA TCCCGCGGCC TGTACACGCG GCTACGAGTC GACCCAGGCG ATGATCGACC GGATGAAGCG CCAAGACCCT ACCTTCGACA TCCGCTACGA CGAGTTCCCG TTCAACACGG ATGCAAAATG TACTGTGCCG CTTGGTAATC CGACGGGTGT GCGCGGTGCG GCCCGGGCGC CGTACGCCAA TCCGGCATAC CCGCAGCCGT GGGATTCCAC CCCGAAGAAG GATCCGGACA AGCTCAATCT GAACCCGCTG GCGACCCAGC TGGCAGCGCT GATGGGAGTA CACGCGAAGT AG
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Protein sequence | MLSKLAKIQL IVFVIVGLVA IVYVGAKYAR LDKLAGVGMY KVVAELPDSG GIFTNAEVTY LGVPVGRVGQ LKLTQKGVDV TLELNSGGPD IPASAVAVVA SRSAIGEQFV DLQPTSTGAP YLADGSRITK SQLPPPLQDV VASAIDFTSS IPVDDLHTVI TELGKAFNGQ GENLTRLVDS LGKLSRAGVD NIGATVDLID NSNVVLQTQA EQSDEILAWS RSINLITATL QSSDPDLRRL LTTGTLSATQ ISNLIQRNGG DLSKVVKDLG EVARTVQPAG YATSTTFAML SALSAGSHTP APGDGQIHFG VVLETNNPAA CTRGYESTQA MIDRMKRQDP TFDIRYDEFP FNTDAKCTVP LGNPTGVRGA ARAPYANPAY PQPWDSTPKK DPDKLNLNPL ATQLAALMGV HAK
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