| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_0224 |
|---|
| Symbol | |
|---|
| ID | 8549551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 246483 |
|---|
| End bp | 247277 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | 2-oxopent-4-enoate hydratase |
|---|
| Protein accession | YP_003271464 |
|---|
| Protein GI | 262200256 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0261621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACG ACATTCAGTG GGCGGCCGAC GCGCTGCTCG AGGCCTATCG GACCAAGACG
CCGATCGATC CGATCACTCC GCGGTTCGCC GACGCTCCGT TGTCGGCGGC CTACGAGATC
GCGCTGGCCC AGGTGCAGGC GTGGGAGAAG GACGGCGACA CCGTCAAGGG GCACAAGGTG
GGTCTCGCCT CGCGGGCCAT CCAGGCCCAG ATGGGGGTCG ACCAGCCCGA CTTCGGCCAC
CTCACCGCGA GTATGTTCCA CCTCGAGCAT CAGCCGATCC CGGCCGGCAC GTACATGCAG
CCGCGGATCG AGCCCGAAGT GGCGTTCGTG CTCGCCCGCC CGCTGACGGG CCCGGGGGTG
ACCGTCGCCG AGGCCGCCGC CGCCGTCGAC TTCGTCCTGC CGGCACTCGA GATCGTCGAC
TCCCGAATCC GGGACTGGCA GATCGGCATC TTCGACACCG TCGCCGACAA TGCGTCGTCG
GGTGGTGTCA TCCTCGGCAG TCGACCCAGC CGGCTATCCG ACGTCGACCT GCGGCTGGCC
GGCTGCACGC TGCACGTGAA CGGCGAGCTG GTGGCCACCG GCGCGGGCGG AGCGGTACTC
GGCTCGCCGC TCAATGCGCT TGTCTGGCTG GCTAATACCG TCGGACCGCT CGGGGTCACC
CTCGAACCCG GACATGTGGT GTTGCCGGGC TCGATGACCC AGGCCGTACC GATCATGCCC
GGCGACACCG TCGTGACCAC CATCGCGGGC GTCGGGAGCG TCACCGCGTT GCTCGGAGAG
GACAACAACT CATGA
|
|---|
| Protein sequence | MADDIQWAAD ALLEAYRTKT PIDPITPRFA DAPLSAAYEI ALAQVQAWEK DGDTVKGHKV
GLASRAIQAQ MGVDQPDFGH LTASMFHLEH QPIPAGTYMQ PRIEPEVAFV LARPLTGPGV
TVAEAAAAVD FVLPALEIVD SRIRDWQIGI FDTVADNASS GGVILGSRPS RLSDVDLRLA
GCTLHVNGEL VATGAGGAVL GSPLNALVWL ANTVGPLGVT LEPGHVVLPG SMTQAVPIMP
GDTVVTTIAG VGSVTALLGE DNNS
|
|---|
| |