Gene Gbro_0127 details

Gene Information

• Locus tag: Gbro_0127
• ID: 8549454
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gordonia bronchialis DSM 43247
• Kingdom: Bacteria
• Replicon accession: NC_013441
• Strand: +
• Start bp: 142798
• End bp: 146214
• Gene Length: 3417 bp
• Protein Length: 1138 aa
• Translation table: 11
• GC content: 66%
• Product: lysyl-tRNA synthetase
• Protein accession: YP_003271369
• Protein GI: 262200161

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCTCG ACACCCCTTC GTCGGACCTC CCGGTCAGCA CCGACGACAC TGCTGAGCAC 
CAGCCCACCC CAGCGCACCG TCCGCCGTCG GCGGCCGATC GCCGATCCGT CGACCTGCTC 
GAAAAGATCA GGCGGCCCAG AGGATTCGGG GCCGGCGCAC CCAAGATCGC GGGCACTGTG 
GTCGGCGTGC TGGCCGGCAT CGCGCTGTTG TCGAGCATCT TCCCGCTGTT CCGCCGGCTG 
ATCCACTACC CGCGCGACTT CATCGACAAC TACATCGTCT CGCTGCCCAA CACGAGTCTG 
GCGTGGGCCT TCGTGCTGGC GCTGGTCGCG ATCGCACTGT CGTCACGCAA ACGCATCGCG 
TGGTGGATCG CGACGATCTA CCTGGTGCTG TTCATGGTGA GCAATGCGCT GCTGCTCGTC 
GATCCGGTGG CCACCGACTT CGGCGTCGAC ACCGACGAAC GCATCCAGAT CTGGATCGGA 
CTGGGAATCG ATGCGGCCGC ACTCATCTTC CTGATCGTCA CCTACCGGCA GTTCTACACA 
CGTGTCCGCC GCGGCGCCCT CTTCCGGGCC CTCGGTGTGC TCATCGTCGG ACTCACCGCC 
GCCACCCTCG TCGGATGGGG TCTGGTGTGG GCGTGGCCGG GGAGTCTGGA GCGGACCGAA 
CGCCTGCCGT ACGCGTTCAA CCGGGTGGTC ACCTTCGGCA GCATCGACAG CCGAACCTTC 
GACGGTCACC ACACCCACAT CGTCATCGAC AGTGCACTGG GGCTGCTCGG GGCGCTGGCC 
CTTATCGCCG CGGCGACGGT GCTGTTCCGC TCACAGCGAC TGGAATCGTT GATGACCAGC 
GACGACGAGA AGCTGATCCG CGCACTGATC ACCCGATTCA ACGACGACGA TTCGCTGGCC 
TACTTCTCCA CCCGCCGCGA CAAGGCGGTG GTGTTCTCAC CCGACGGCCG GGCCGCGATC 
ACCTACCGCG TGGAGATCGG CGTCGGACTG GCCGGCGGCG ACCCGATCGG AGATCCGGAA 
TCCTGGCCCG ACGCCATCGC CGAGTTCCTC ACGTTGTGCG ATCGGTATGG CTGGCATCCG 
GCGGCGATGG GGTCGAGTGC GCGGGGCGCG GCCGCCTACG ATGCGGCCGG ATTCGGCTCG 
CTCTCCATCG GCGACGAAGC CATCCTGCAC ACCCGCGAGT ACACGATCAG CGGACCCGCG 
ATGAAGGCGG TGCGGCAGGC CGTGACGCGC ACCCGCCGCG CCGGGGTGAC GGTGCGGATT 
CGACGGCACG GCGAGGTGCC CGACGATGAG ATGCCACAGG TCATCGCCCG GGCCGATGCG 
TGGCGGGACA CCGACGAGGA ACGCGGCTTC GCGATGGCGC TCTCGCGGCT CGGTGACCGT 
GCCGACGACG ACTGCCTGCT GGTGGAGGCC GTCGAACATG CGGGCACCCC CGAGGAGAAG 
GTGATCGGGA TGCTCTCGTT TGTGCCGTGG GGCCGACGAG GTGTCTCGCT GGATGTGATG 
CGACGCGATC GTGGCAGCGT GAACGGCGTC GTCGAGACGA TGGTCACCGA ATTGTGCCGC 
AACTCCGAGC AATTCGGTAT CACCGAGATC TCGCTGAACT TCGCCACCTT CCGCGCCTTC 
TTCGAGCAGG GCCCGCAGAT CGGGGCCGGG CCCATCATGC GGCTCGGCTA CTCGGTGCTC 
ATGTTCGGCT CACGGTTCTT CCAGATGGAG TCGCTGTACA AGTCGAACGC CAAATATCTG 
CCGGACTGGC AGCCCCGGTT CCTGTGCTTC GAGGACAACC GAATCCTGCC GCGCGTCGGG 
CTGGCCGCCA TCGTCACCGA GGGCTTCGTG CAGCTGCCGA GGTTCGGGCG CAAGCAGCAT 
TACATCGCAG GTCAGTCGTC GATTCCGGCC GGAGTCGACG CCGACGCATT GATCGCGCAG 
CTGGAGTCCG AGGAGGACCG CACGGCCGTC GAGGTGCACC GGCCTGAGCA GGTACGGGTG 
CGCGTCGCCA AGCTCGACCG GCTGATCGAG GAGGGCTTCG ACCCGTACCC GCCCGCCGAT 
GCGCCGACAC ACACGATTGC CGAGGCGATC GCCGAGCCGG AGGGCACGCA GGTCACCATC 
GCCGGACGGG TCACCAAGAT GCGCGACTTC GGCAAGGTCA CCTTCGCCGA TGTGCACGAC 
TGGTCCGGGC AGATACAGAT GCTCGTCGAG GCGTCGCGGG TTATCCCGGG CACCCCCGAC 
TTCGGATCCG ACGTCGACCT CGGCGACCTC GTCGAGGCAC GTGGGGTGAT CGGGCGGAGC 
CGGTCCGGGG AACTGTCGGT GCTGATCGAT GCGTGGCGCT TCAACGGCAA ATGCCTGCGG 
CCGCTGCCCG ATAAGTGGTC CGGACTCACA GACCCGGAAG CCCGTGTGCG GCAACGCTAT 
GTGGACCTTG CGATCAACCC GCGCAGCCGT GAGCTGCTGG CCACCCGGAG TGTGGTGGTC 
AAGGCGCTGC GGGATTTCCT CGCCGACCGC GGATTCATGG AGGTCGAGAC GCCCATCCTG 
CAGCAGATTC ACGGCGGGGC GAATGCCACC CCGTTCCAGA CCCACATCAA CGCCTACAAC 
CTGGATCTGT ATCTGCGGAT CGCGCCGGAG TTGTATCTCA AGCGGCTGTG TGTCGGCGGC 
GTCGAGAAGG TGTTCGAGAT CGGTCGCAAC TTCCGCAACG AGGGTGTCGA CTTCAGTCAC 
AACCCCGAGT TCACCAGCCT GGAAGCCTAT GCGGCACACA GCGATTACCT GAAGATGCTG 
GACCTGACGC GGGAAATGAT CCAGCACGCA GCGACTGCCG CGCACGGCGA GCCGGTGATC 
ATCCGCGTCG ACGACGAGGG CAACGAGCAG CGCGTCGACA TCTCCGGTGA CTGGCCGGTC 
CGGACCGTGC ACGAGGTGGT GTCGGAAGGC GCCGGTGTCG AGATCACATC GGACACAGAG 
GTTTCCGAGC TTCGCGGCAT TTGCGATCGT CTGGAGATCG CCTACCGGCC GGACTGGGAT 
GCCGGGCAGA TCGTGCTGGA ACTCTACGAG CATCTCGGCG AGGATCGCAC CACCGTCCCG 
ACGTTCTACA CCGATTTCCC CACGTCGACG TCGCCGCTGA CCCGGGCGCA CCGCAGCAAA 
CCCGGCGTGG CCGAGCGCTG GGATCTGGTG GCCTGGGGGG TGGAACTCGG TACCGCGTAC 
ACCGAGCTGA CCGATCCGGT CGAGCAACGC AAACGGCTGA CCGCACAGTC GATCCTGGCC 
GCCGACGGTG ATCCGGAGGC GATGGAGTTG GACGAGGACT TCCTCACCGC CCTCGAGTAT 
GCGATGCCGC CCACCGGTGG TCTCGGCGTC GGGGTGGATC GGGTGGTCAT GCTCATCACC 
GGGCAGTCGA TTCGTGAGTC GCTGGCGTTT CCGATGGTCA AGCCGACGGA CGCGTGA 

 

Protein sequence

MALDTPSSDL PVSTDDTAEH QPTPAHRPPS AADRRSVDLL EKIRRPRGFG AGAPKIAGTV 
VGVLAGIALL SSIFPLFRRL IHYPRDFIDN YIVSLPNTSL AWAFVLALVA IALSSRKRIA 
WWIATIYLVL FMVSNALLLV DPVATDFGVD TDERIQIWIG LGIDAAALIF LIVTYRQFYT 
RVRRGALFRA LGVLIVGLTA ATLVGWGLVW AWPGSLERTE RLPYAFNRVV TFGSIDSRTF 
DGHHTHIVID SALGLLGALA LIAAATVLFR SQRLESLMTS DDEKLIRALI TRFNDDDSLA 
YFSTRRDKAV VFSPDGRAAI TYRVEIGVGL AGGDPIGDPE SWPDAIAEFL TLCDRYGWHP 
AAMGSSARGA AAYDAAGFGS LSIGDEAILH TREYTISGPA MKAVRQAVTR TRRAGVTVRI 
RRHGEVPDDE MPQVIARADA WRDTDEERGF AMALSRLGDR ADDDCLLVEA VEHAGTPEEK 
VIGMLSFVPW GRRGVSLDVM RRDRGSVNGV VETMVTELCR NSEQFGITEI SLNFATFRAF 
FEQGPQIGAG PIMRLGYSVL MFGSRFFQME SLYKSNAKYL PDWQPRFLCF EDNRILPRVG 
LAAIVTEGFV QLPRFGRKQH YIAGQSSIPA GVDADALIAQ LESEEDRTAV EVHRPEQVRV 
RVAKLDRLIE EGFDPYPPAD APTHTIAEAI AEPEGTQVTI AGRVTKMRDF GKVTFADVHD 
WSGQIQMLVE ASRVIPGTPD FGSDVDLGDL VEARGVIGRS RSGELSVLID AWRFNGKCLR 
PLPDKWSGLT DPEARVRQRY VDLAINPRSR ELLATRSVVV KALRDFLADR GFMEVETPIL 
QQIHGGANAT PFQTHINAYN LDLYLRIAPE LYLKRLCVGG VEKVFEIGRN FRNEGVDFSH 
NPEFTSLEAY AAHSDYLKML DLTREMIQHA ATAAHGEPVI IRVDDEGNEQ RVDISGDWPV 
RTVHEVVSEG AGVEITSDTE VSELRGICDR LEIAYRPDWD AGQIVLELYE HLGEDRTTVP 
TFYTDFPTST SPLTRAHRSK PGVAERWDLV AWGVELGTAY TELTDPVEQR KRLTAQSILA 
ADGDPEAMEL DEDFLTALEY AMPPTGGLGV GVDRVVMLIT GQSIRESLAF PMVKPTDA