| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6885 |
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| Symbol | |
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| ID | 8549309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 9427623 |
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| End bp | 9428471 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646391549 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_003271241 |
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| Protein GI | 262200032 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAC TCCCTGAAGT CGAGACCGTG CGCCGCACCC TGGCGCCGGT GTTGGGACAG
CGGGTCGAAG CGATGTGGAC CAGCGGTCTG CCGCTGCGTC TCAACCGGCC GGTGCCCGAG
GAGCTGCTGC GCGAGATCTC GCTCGGACGC ACGGTCGAGG ATATTCGGCG CTGGGGCAAG
TACCTGCTCC TCGACCTCGC CGGCGCGGGT CATTCGGTTC TCGTACACCT GGGCATGAGC
GGTCGGCTGC GCATGATGGC GGCTGCGGGC GAGCGGCCGC CGCACACGCA CGTGGCCTGG
TTGCTGAGCG GCGGCGCGCC GCCGGCCGAG CTGCGCTATT CGGATCCGCG TCGCTTCGGC
GTGATCGACG TGGTCGAGCG CGGCAACGAG CGCGCGCATC CCTCGCTGGC GCGGCTGGGC
GAAGATCCGC TGACCGGCGC GCTGACCGGC GCGCTGCTGC ACGCGGGTTC GCGCCGGGTG
CGGCGCAGCA TCAAGACCTT CTTGCTCGAC CAACACACGG TCGCCGGCGT GGGCAATATC
TATGCATCCG AGGCCCTGTG GCAGGCGCGC ATTCTGCCGA CCATGCCGGC CGAGCGGCTG
AGCAAGGCGC GCGCCGATGC GCTGGCCGCG GCGATTCACG AGGTGTTCGC GCGCGCGCTC
GAGCACGGCG GCACCAGCTT GCGCGATTTC GTCAACGCGG ACGGACACGC GGGCGAGCAC
GCGCACTATC TGTGGGTGTA CGAGCGCGAC GGCGAGCCGT GTCCGCGTCC CACGTGCCCG
GGCATCATCC GTCGCACGGT GTTGCAAGCG CGCTCGACCT TCCACTGTCC GCGCTGTCAG
CGCCGCTGA
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| Protein sequence | MPELPEVETV RRTLAPVLGQ RVEAMWTSGL PLRLNRPVPE ELLREISLGR TVEDIRRWGK
YLLLDLAGAG HSVLVHLGMS GRLRMMAAAG ERPPHTHVAW LLSGGAPPAE LRYSDPRRFG
VIDVVERGNE RAHPSLARLG EDPLTGALTG ALLHAGSRRV RRSIKTFLLD QHTVAGVGNI
YASEALWQAR ILPTMPAERL SKARADALAA AIHEVFARAL EHGGTSLRDF VNADGHAGEH
AHYLWVYERD GEPCPRPTCP GIIRRTVLQA RSTFHCPRCQ RR
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