Gene Hoch_6662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6662 
Symbol 
ID8549079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9133089 
End bp9134270 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content71% 
IMG OID646391322 
Producthypothetical protein 
Protein accessionYP_003271021 
Protein GI262199812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.633084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAGCT TTCCGCCGCG CGGCGCGCTG ATGCTCGCTG TCCTGCTCGG CCCGCTGGGT 
CTGCTGTGGC TGATGCCGGC GGTGGCGCAC GCCCATCGCA ACACGGTGAC TCGCTCGCTC
GTGCGCATCT CGCACGACCA GCGCGAGGTC CGCTACCGGC TCGAGCTCGA ACCCCACGAC
ACCGCCGAGA TGCTCGGCCT GGCGCCCGGC ACCGAACCCA CGGACGCGCA GGTGCTGGCC
GGGCGCGCGC GCCTGTTCAG CCGCGTGCTG CGACACATCA CCGTGCGCGA CAGCGCCGGC
ATGGGCAGCG ACCTCTTGGC CTGCCCGCCC ACGCCCGAGA AGCTCAGCCT CGAGCAGGAC
AGCGCCGGCA AGCACGTGGT GCTCACCTGG CTCGCGCGCT GCTCGGCGCC CATCCACACC
CTGGTGGTCG AATACGCCCT GTTCGCCGAC AACGACCCGG CCTTTCGCGC CTTCGTCAAC
ATCCGCTATC GCGGCGACGA CCACCTGGTC GAACTCGGCG TCGCCGGCAA CCGCCTGGTC
TGGAACCTCG ACGATCCCCC GCCCGACGAC CTCGGCGGCT TTGTGCTCAG CGGCGTCGAA
CACATCGTCT TTGGCTTCGA CCACGTGGCC TTTCTGCTGT GCCTGCTGCT GCCGCTGGCG
ATCGTGCGCG ACAACGACGA GGGCTGGAAA GCGCGCCCCA TCACCGCGAC CTTGGCCCGC
ACCGGCCTGC TGGTCACCGC GTTCACGGCC GCGCACTCGA GCACGCTCAT CGCCGCCAGC
CTGGGCTGGG TGCAGCTCGA CAGCCAGCTC ATCGAGAGCG TCATCGCGCT GTCCATCGTG
CTCGTGGCCA TCGACGGCGC GCTGCGCCCC GGCGCTCGCT TTCGCATCTG GGTGGTGTTC
CTGTTCGGGC TGATGCACGG CCTGGGCTTC GCCTCGATGC TGGCCGCGAT CCTGCCGCCC
GCGGCCGTGG TGGTGCCGCT GCTGGCCTTC AACGTCGGCG TCGAGCTCGG CCAGCTCGCC
CTGGTGCTGC TGGCGCTGCC CTGCTTGCTG GCGCTGGTGA GCGTGTGCGG GGCGCCGAGC
TATCGCCGCT GGGTGCTGCC CGTGGCCGCG CTGGCGCTGG CCGTACTGGG CCTGCTGTGG
CTCATCGAGC GGCTGTTCTC GCTGACCATC CTCGGCTTCT GA
 
Protein sequence
MRSFPPRGAL MLAVLLGPLG LLWLMPAVAH AHRNTVTRSL VRISHDQREV RYRLELEPHD 
TAEMLGLAPG TEPTDAQVLA GRARLFSRVL RHITVRDSAG MGSDLLACPP TPEKLSLEQD
SAGKHVVLTW LARCSAPIHT LVVEYALFAD NDPAFRAFVN IRYRGDDHLV ELGVAGNRLV
WNLDDPPPDD LGGFVLSGVE HIVFGFDHVA FLLCLLLPLA IVRDNDEGWK ARPITATLAR
TGLLVTAFTA AHSSTLIAAS LGWVQLDSQL IESVIALSIV LVAIDGALRP GARFRIWVVF
LFGLMHGLGF ASMLAAILPP AAVVVPLLAF NVGVELGQLA LVLLALPCLL ALVSVCGAPS
YRRWVLPVAA LALAVLGLLW LIERLFSLTI LGF