| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6638 |
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| Symbol | |
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| ID | 8549055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 9098416 |
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| End bp | 9100350 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 646391298 |
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| Product | glycoside hydrolase family 35 |
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| Protein accession | YP_003270997 |
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| Protein GI | 262199788 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.119053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000205681 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGAAGCAC ACCGCCGCAG CACCCTCGGC GCAGCCGGAA TAATCCTCGA TGACGCAGAC
GGCGGCGCCG GCGCGCGCGA GTTGCCGCTG TTCTCGGGCG TGCTGCACTA CTGGCGCGTC
GACCGCGCCG ACTGGCGCGC GTGTCTCGCC GCCATGCGCG AGATCGGCTT CGCGATGGTC
CACGTGCCGG TGCCGTGGAG CGTGCACGAG CGCGGCCCGG GCAGCTACGT TTGGCGCCAG
GAGCGCGACC TCGGTGGGTT TCTCGACCTG CTGGCCGAAA TGGGCATGCA CGCGGTGCTC
GAACCCGGGC CCGTGATCGG CGCCGAGCTG CCGGGTGGCG GCGTGCCCGC GCGCATCCTC
GACGACGCCG CGCTGCTGGC GCGGACCGCG CGCGGTGCGC CGGCGTGGGT GACGGCGGTG
CCGCAGATGA TGACCGTGCC CTGCCTGGCG GCCTCGGCGC TGCGCGAGCA GGTCCTGGCC
TGGTTCGCTG CGGTAGCCGA AATCGCGGCG CCGCGCCTGG TGCCGAACGG GCCGGTCGCG
GCCGTGCACC TGGGTCGTCA CGCCGATCTC GTCGCCCAGC TCGGCCCCTT CGAGTACGGC
TATCAACCCG ATGCGCTGCG CCTGTGGCAG GAGCTCGAGG GCGGCGAGCC GCCGCGGCAG
TGGTCGGCCG AAGACGGCGC GCGCATGGCG GCGTGGATGC AATGCCGCGA GGTGGGCATG
CGCCGCGATC TGGTCTGGCT GTCGGGCGCG CTCGACCAGG TCGGACTGCG CGAGGTGGTG
CGCCTCGTCG ATCTACCGTG GTCGCTGCCC GGCGCCTTCG ACATCGCCGC GCTCGAACGC
GCGCTGGGCG GCGAGGTCGC TGTCGGCATG CGCGTCGGCC ACCGTCCAGC CGTACCCGCG
GCCCTGCACC GGCGCGCGCT ATACCTCACC GGCTCGGCGC GCCTGCCTGT ATTCGGACAG
GTGTCCGTCG GTGGCCCGAC GCTGGGGGTG CCGGTCCCTG TGGACGCCGC TCAGCGCGCC
GTGCTCGGCG TCTTGGCTGC GGGCGCGCGC GGCGTCGGTC TGCATCTGCT GGCCGAGTGC
AGCGGCTGGT ACGGGGCGCC CGTGAGCGAA CTCGGCGAGG CCCAGCAGGC CGCCGAGTGG
CTCACGCGGG TGCTCGCGGC GCTGCGTGAA GTATCGTGGA CCACGCTGCG CAGGCACACG
CCGGTGGCCG TGATGGTCGG CCGCGCGGAG CAGCGCTTTG CCGCCGCGTC CTCGGCTGCG
GGCGCGCTGG GGTCGCTGCT CGAGGGCTTG TTGCCGCCGG GGACCAACGA CCGGGCCAGC
CTGGCGCGCG ACCTCGACGC CGCTGCCAGT CGCCGCTGGA CCGAGGCCGC CATCGATGCA
CTCGAACTGG CACAGATTCC CTACCGCGTG GTCGACGAAG GCTGCGCGCC CGAGGCCTTT
GCCGGGGTCC GCGCCGTGAT CGCGCCGACC CTGCGCCGTG TCGATCGCGG CGCCTGGCAG
CGGCTGCACG AGCTCGCCCG CGGCGGCGCG GTGGTGATCG CCGGTCCCGA GCGTCCGCGC
TGCGATGAGC GCGGCCGGGA GCTGGGCGAC GACGCCGCGC TGCCGGCGCG CGCGGGGCTC
ATGCGGGCGG CCTCGCTCGA GGACCCCGAG GGCCTGGCCG ATGACCTCGC CGAGGTCGCC
GGGGAGCTGT CCGAGCTGTG GCTCACGGCC GAGCAGGGCG AGGTGGACTG CTCGCTGTTC
AGCGACCCGA GCGGCGCGCC GCGGGTGCTG TTCGTGAGCA ACCGGCGCGC CGCGGCGGTG
GTCGCCGATG TCCTCGTGCC CGCCGGGGTC GCGCTCGAGG ACGCGATCAC GGGTGAGACC
CTGCGGCCCG GGCGCGACGG CGTCGTCGAT GTGCGCCTCG AGCCGCTGCA GATCGCCATG
CTGCTGGTGC GCTGA
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| Protein sequence | MEAHRRSTLG AAGIILDDAD GGAGARELPL FSGVLHYWRV DRADWRACLA AMREIGFAMV
HVPVPWSVHE RGPGSYVWRQ ERDLGGFLDL LAEMGMHAVL EPGPVIGAEL PGGGVPARIL
DDAALLARTA RGAPAWVTAV PQMMTVPCLA ASALREQVLA WFAAVAEIAA PRLVPNGPVA
AVHLGRHADL VAQLGPFEYG YQPDALRLWQ ELEGGEPPRQ WSAEDGARMA AWMQCREVGM
RRDLVWLSGA LDQVGLREVV RLVDLPWSLP GAFDIAALER ALGGEVAVGM RVGHRPAVPA
ALHRRALYLT GSARLPVFGQ VSVGGPTLGV PVPVDAAQRA VLGVLAAGAR GVGLHLLAEC
SGWYGAPVSE LGEAQQAAEW LTRVLAALRE VSWTTLRRHT PVAVMVGRAE QRFAAASSAA
GALGSLLEGL LPPGTNDRAS LARDLDAAAS RRWTEAAIDA LELAQIPYRV VDEGCAPEAF
AGVRAVIAPT LRRVDRGAWQ RLHELARGGA VVIAGPERPR CDERGRELGD DAALPARAGL
MRAASLEDPE GLADDLAEVA GELSELWLTA EQGEVDCSLF SDPSGAPRVL FVSNRRAAAV
VADVLVPAGV ALEDAITGET LRPGRDGVVD VRLEPLQIAM LLVR
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