| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6524 |
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| Symbol | |
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| ID | 8548941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 8954776 |
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| End bp | 8956071 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646391187 |
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| Product | Coproporphyrinogen dehydrogenase |
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| Protein accession | YP_003270886 |
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| Protein GI | 262199677 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCA TCAGTGTTCG TCCGCCCAAG GGGACGCCCA CGCGGCGTGG TTTCATCACC
AACCACCCGC CCTATCGCCG CTGGCGTCCC GACGCCGTGG CCGGGTTATT CGAGCCGGCG
CCGCTCAACC TGTATATCCA CACGCCCTAC TGCGTGCAGC GCTGCGCCTA CTGCCACTAC
AAAACCGCGA TCCTCGGCGA GCATCGCCGG GTCGAGATCG ACCGCTACGT GGCCGCCGTG
TGCCGCGAGA TCGAGCTGGC CTGCGAGCGT CTTCACGTCG GCGAGCGCCC GGTGGTGTCG
CTGTATTTCG GCGGCGGCAC ACCGACCCTG CTCAGCAGCG ACAACCTCAG CCACCTGATG
GAATGCGTGC GCGCCAACTT CGCCTTGCAG GACGCCGAGA TCACGATCGA GAGCGGCCCG
GTCACGCTCA CCGAGCGCAA GGCCACGCTG CTGCGCGAGC TCGGCGTCAA CCGCTTCAGC
CTCGGCATCC AGTCCTTCTC CGATGACATC GTCGCCCAGA CCGGACGCGT GGACACCGAG
GAGCAGGCGC TGGAGGCGAT CGCGCTGGCC AAGGACATGG GCGCGGTGGT CAACATCGAC
CTGCTCAGCG GCCTCGCCGG CGAGACCGAG GAGAGCTGGG CGCGCAGCCT CGAGCAGGCG
CTCGCGGTCG ACGTGCACAC CCTGTCGATC TACAAGATGG AGCTGTACGC CAACACCGGC
TACTACGATG CGCTGCGCAA GGATGAGCTG GTGCTGCCCA CGGACGAGCA GGAGCTCGGC
TTCATCCGCA CCGCCATCGC GCGGCTGGCG ACGGCCGGAT ATCTGCCCGT CAACTTCTTC
ACCTTCGGCA AGGGCGGCGG GTTCGCGCCC CGCAACTTGC GCAGCAAATG GCGCGGCGGC
GACACGGCCG CCTTCGGCCT GTCGGCGTTC GGCAGCTTGG GCGTCCACTC GTACCAAAAC
ACCAACTCCA TGGAGCGCTA TCTCGAGCGC GTCGAGTCCG GCGAGCTGCC GGCGCAGCGC
GGGTATCGCC TCAGCTCGCG CGACCTCATG GTGCGCGACG TGGTGCTGGG CATGAAGCTC
CTGTACATCG AGCGCGATGC GTTCCGCGAG GCGCACGGAT TCGACTTGCC GGCCCTGATC
CCCGAGGCCG TGAGCGGGCT GGTGAGCAAG GGGCTGCTGG AGATCAGCGA CGAGCGCATC
GCGCTCAGCG ATGAGGGCAT GGTGTGGGGC GATTTCGTCG GCCGTACGCT GGGCGACGCC
CTCGAGCGCA TGGGAGAGCG GAGGGCGCAG GCATGA
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| Protein sequence | MTRISVRPPK GTPTRRGFIT NHPPYRRWRP DAVAGLFEPA PLNLYIHTPY CVQRCAYCHY
KTAILGEHRR VEIDRYVAAV CREIELACER LHVGERPVVS LYFGGGTPTL LSSDNLSHLM
ECVRANFALQ DAEITIESGP VTLTERKATL LRELGVNRFS LGIQSFSDDI VAQTGRVDTE
EQALEAIALA KDMGAVVNID LLSGLAGETE ESWARSLEQA LAVDVHTLSI YKMELYANTG
YYDALRKDEL VLPTDEQELG FIRTAIARLA TAGYLPVNFF TFGKGGGFAP RNLRSKWRGG
DTAAFGLSAF GSLGVHSYQN TNSMERYLER VESGELPAQR GYRLSSRDLM VRDVVLGMKL
LYIERDAFRE AHGFDLPALI PEAVSGLVSK GLLEISDERI ALSDEGMVWG DFVGRTLGDA
LERMGERRAQ A
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